Evidence map›Paper›PMID 25262650›Full record

ArticleAmerican journal of human genetics2014

Widespread signals of convergent adaptation to high altitude in Asia and america.

Matthieu Foll, Oscar E Gaggiotti, Josephine T Daub, Alexandra Vatsiou, Laurent Excoffier

Open access · greenAbstract readComparative Study
In one paragraph

Article in American journal of human genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 91 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
91citing papers in PubMed, 1 pooled it
9.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

91 citing papers in PubMed, 1 synthesis or guideline pooled it, 150 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Exploring the genetic footprints of high altitude adapted humans and livestock.Mammalian genome : official journal of the International Mammalian Genome Society · 2025
    Review
  8. Review
  9. Advances in Understanding Adaptive Hemoglobin Concentration at High Altitude.American journal of human biology : the official journal of the Human Biology Council · 2025
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Immune consequences of exercise in hypoxia: A narrative review.Journal of sport and health science · 2024
    Review
  16. Article
  17. Article
  18. FunctionalScience advances · 2024
    Article
  19. Review
  20. Article

31 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 3 countries.

Matthieu FollCMPG, Institute of Ecology and Evolution, University of Berne, Berne 3012, Switzerland; Swiss Institute of Bioinformatics, Lausanne 1015, Switzerland. Electronic address: matthieu.foll@epfl.ch.
Oscar E GaggiottiSchool of Biology, Scottish Oceans Institute, University of St Andrews, St Andrews, Fife KY16 8LB, UK; Laboratoire d'Ecologie Alpine (LECA), UMR 5553 CNRS-Université de Grenoble, Grenoble, France.
Josephine T DaubCMPG, Institute of Ecology and Evolution, University of Berne, Berne 3012, Switzerland; Swiss Institute of Bioinformatics, Lausanne 1015, Switzerland.
Alexandra VatsiouLaboratoire d'Ecologie Alpine (LECA), UMR 5553 CNRS-Université de Grenoble, Grenoble, France.
Laurent ExcoffierCMPG, Institute of Ecology and Evolution, University of Berne, Berne 3012, Switzerland; Swiss Institute of Bioinformatics, Lausanne 1015, Switzerland.
University of Bern · CHCentre National de la Recherche Scientifique · FRSIB Swiss Institute of Bioinformatics · CHUniversité Grenoble Alpes · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Living at high altitude is one of the most difficult challenges that humans had to cope with during their evolution. Whereas several genomic studies have revealed some of the genetic bases of adaptations in Tibetan, Andean, and Ethiopian populations, relatively little evidence of convergent evolution to altitude in different continents has accumulated. This lack of evidence can be due to truly different evolutionary responses, but it can also be due to the low power of former studies that have mainly focused on populations from a single geographical region or performed separate analyses on multiple pairs of populations to avoid problems linked to shared histories between some populations. We introduce here a hierarchical Bayesian method to detect local adaptation that can deal with complex demographic histories. Our method can identify selection occurring at different scales, as well as convergent adaptation in different regions. We apply our approach to the analysis of a large SNP data set from low- and high-altitude human populations from America and Asia. The simultaneous analysis of these two geographic areas allows us to identify several candidate genome regions for altitudinal selection, and we show that convergent evolution among continents has been quite common. In addition to identifying several genes and biological processes involved in high-altitude adaptation, we identify two specific biological pathways that could have evolved in both continents to counter toxic effects induced by hypoxia.

Indexed as

AltitudeBiological EvolutionGenetics, PopulationAcclimatizationAdaptation, PhysiologicalAlgorithmsAmericasAsiaBayes TheoremComputer SimulationDatabases, GeneticDNA Copy Number VariationsGene Expression ProfilingGenome, HumanHumansHypoxia

Identifiers

PMID25262650
PMCPMC4185124
OpenAlexW1981234696

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.