Evidence map›Paper›PMID 25262472›Full record

ArticleVirology2014

Influenza A viruses with different amino acid residues at PB2-627 display distinct replication properties in vitro and in vivo: revealing the sequence plasticity of PB2-627 position.

Alex W H Chin, Olive T W Li, Chris K P Mok, Miko K W Ng, Malik Peiris, Leo L M Poon

Abstract read
In one paragraph

Article in Virology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 27 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Alex W H ChinCentre of Influenza Research & School of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong.
Olive T W LiCentre of Influenza Research & School of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong.
Chris K P MokCentre of Influenza Research & School of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong; The HKU-Pasteur Research Pole & School of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong.
Miko K W NgCentre of Influenza Research & School of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong.
Malik PeirisCentre of Influenza Research & School of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong; The HKU-Pasteur Research Pole & School of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong.
Leo L M PoonCentre of Influenza Research & School of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong. Electronic address: llmpoon@hku.hk.
HKU-Pasteur Research Pole · HKUniversity of Hong Kong · HK

Funding

NIAID NIH HHS HHSN272201400006C
6 · The paper itself

Abstract

Sequence analyses of influenza PB2 sequences indicate that the 627 position almost exclusively contains either lysine (K) or glutamic acid (E), suggesting a high sequence constraint at this genetic marker. Here, we used a site-directed random mutagenesis method to demonstrate that PB2-627 position has a high sequence plasticity. Recombinant viruses carrying various amino acid residues at this position are viable in cell cultures. These PB2-627 mutants showed various polymerase activities and replication kinetics in mammalian and avian cells as well as pathogenicity in mice. Serially passaging these mutants in MDCK cells generated some compensatory PB2 mutations that can restore polymerase activities of the PB2-627 mutants. Of these, PB2-D309N was identified as a novel one. Besides showing that influenza virus can tolerate a wide range of amino acid residues at the PB2-627 position, this study also demonstrates a potential strategy to identify novel mutations that can enhance viral polymerase.

Indexed as

Amino Acid SubstitutionVirus ReplicationAnimalsCell LineChick EmbryoFemaleGene Expression Regulation, ViralHumansInfluenza A virusMiceMice, Inbred BALB CMutationOrthomyxoviridae InfectionsRNA, ViralViral ProteinsPB2 protein, influenza virusRNA, ViralViral ProteinsInfluenzaPB2PB2-627PolymeraseRandom mutagenesis

Identifiers

PMID25262472
PMCPMC4252771
OpenAlexW2076626592

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.