Evidence map›Paper›PMID 25258326›Full record

ArticleDevelopmental dynamics : an official publication of the American Association of Anatomists2014

Early stages of induction of anterior head ectodermal properties in Xenopus embryos are mediated by transcriptional cofactor ldb1.

Carol Zygar Plautz, Brett E Zirkle, Malia J Deshotel, Robert M Grainger

Open access · bronzeAbstract read
In one paragraph

Article in Developmental dynamics : an official publication of the American Association of Anatomists, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Functional Cloning Using a Xenopus Oocyte Expression System.Journal of visualized experiments : JoVE · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Carol Zygar PlautzShepherd University, Department of Biology, Shepherdstown, West Virginia.
Brett E Zirkle
Malia J Deshotel
Robert M Grainger
Shepherd University · USUniversity of Virginia · US

Funding

Genetic Control of Early Retinal DevelopmentR01EY017400 · NEI · UNIVERSITY OF VIRGINIA · PI GRAINGER, ROBERT M · 2006 to 2010
$1.8M
TISSUE INTERACTIONS IN EMBRYONIC LENS AND EYE FORMATIONR01EY006675 · NEI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI GRAINGER, ROBERT M · 1986 to 2005
$1.7M
Mechanisms of Embryonic Lens DeterminationR01EY022954 · NEI · UNIVERSITY OF VIRGINIA · PI GRAINGER, ROBERT M · 2013 to 2015
$1.2M
GENETIC CONTROL OF LENS FORMATIONR01EY010283 · NEI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI GRAINGER, ROBERT M · 1994 to 2001
$466k
CONTROL OF GENE EXPRESSION DURING LENS DEVELOPMENTR01EY005542 · NEI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI GRAINGER, ROBERT M · 1985 to 1989
–
NEI NIH HHS EY05542NEI NIH HHS EY06675NEI NIH HHS EY10283NEI NIH HHS EY17400NEI NIH HHS R01 EY006675NEI NIH HHS R01 EY010283NEI NIH HHS R01 EY017400NEI NIH HHS R01 EY022954
6 · The paper itself

Abstract

backgroundSpecific molecules involved in early inductive signaling from anterior neural tissue to the placodal ectoderm to establish a lens-forming bias, as well as their regulatory factors, remain largely unknown. In this study, we sought to identify and characterize these molecules.

resultsUsing an expression cloning strategy to isolate genes with lens-inducing activity, we identified the transcriptional cofactor ldb1. This, together with evidence for its nuclear dependence, suggests its role as a regulatory factor, not a direct signaling molecule. We propose that ldb1 mediates induction of early lens genes in our functional assay by transcriptional activation of lens-inducing signals. Gain-of-function assays demonstrate that the inductive activity of the anterior neural plate on head ectodermal structures can be augmented by ldb1. Loss-of-function assays show that knockdown of ldb1 leads to decreased expression of early lens and retinal markers and subsequently to defects in eye development.

conclusionsThe functional cloning, expression pattern, overexpression, and knockdown data show that an ldb1-regulated mechanism acts as an early signal for Xenopus lens induction.

Indexed as

AnimalsDNA-Binding ProteinsEctodermEmbryo, NonmammalianGene Expression Regulation, DevelopmentalLens Capsule, CrystallineNeural CrestOrganogenesisRetinaXenopus laevisXenopus ProteinsDNA-Binding ProteinsXenopus ProteinsXLdb1 protein, Xenopusexpression cloningInductionldb1lensplacodesXenopus

Identifiers

PMID25258326
PMCPMC4237673
OpenAlexW1706826337

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.