Evidence map›Paper›PMID 25258315›Full record

ArticleThe Journal of biological chemistry2014

Torque generation of Enterococcus hirae V-ATPase.

Hiroshi Ueno, Yoshihiro Minagawa, Mayu Hara, Suhaila Rahman, Ichiro Yamato, Eiro Muneyuki, Hiroyuki Noji, Takeshi Murata, Ryota Iino

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 36 citations in OpenAlex.

  1. Review
  2. Article
  3. NaNature structural & molecular biology · 2025
    Article
  4. Article
  5. Visualizing Single V-ATPase Rotation Using Janus Nanoparticles.bioRxiv : the preprint server for biology · 2024
    Article
  6. Article
  7. Direct observation of stepping rotation of V-ATPase reveals rigid component in coupling between VProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Rotational Mechanism Model of the Bacterial VFrontiers in physiology · 2019
    Review
  14. Article
  15. Article
  16. Review
  17. Structure and dynamics of rotary VCellular and molecular life sciences : CMLS · 2018
    Review
  18. Review
  19. Rotation Mechanism of Molecular Motor VBiophysical journal · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Hiroshi UenoFrom the Department of Physics, Faculty of Science and Engineering, Chuo University, Tokyo 112-8551, Japan.
Yoshihiro Minagawathe Department of Applied Chemistry, Graduate School of Engineering, The University of Tokyo, Tokyo 113-8656, Japan.
Mayu Harathe Department of Applied Chemistry, Graduate School of Engineering, The University of Tokyo, Tokyo 113-8656, Japan.
Suhaila Rahmanthe Department of Biological Science and Technology, Tokyo University of Science, Tokyo 125-8585, Japan.
Ichiro Yamatothe Department of Biological Science and Technology, Tokyo University of Science, Tokyo 125-8585, Japan.
Eiro MuneyukiFrom the Department of Physics, Faculty of Science and Engineering, Chuo University, Tokyo 112-8551, Japan.
Hiroyuki Nojithe Department of Applied Chemistry, Graduate School of Engineering, The University of Tokyo, Tokyo 113-8656, Japan.
Takeshi Muratathe Department of Chemistry, Graduate School of Science, Chiba University, Chiba 263-8522, Japan, JST, PRESTO, Chiba 263-8522, Japan, t.murata@faculty.chiba-u.jp.
Ryota Iinothe Okazaki Institute for Integrative Bioscience, Institute for Molecular Science, National Institutes of Natural Sciences, Aichi 444-8787, Japan, and the Department of Functional Molecular Science, School of Physical Sciences, The Graduate University for Advanced Studies (SOKENDAI), Kanagawa 240-0193, Japan iino@ims.ac.jp.
Chuo University · JPTokyo University of Science · JPChiba University · JPThe Graduate University for Advanced Studies, SOKENDAI · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

V-ATPase (V(o)V1) converts the chemical free energy of ATP into an ion-motive force across the cell membrane via mechanical rotation. This energy conversion requires proper interactions between the rotor and stator in V(o)V1 for tight coupling among chemical reaction, torque generation, and ion transport. We developed an Escherichia coli expression system for Enterococcus hirae V(o)V1 (EhV(o)V1) and established a single-molecule rotation assay to measure the torque generated. Recombinant and native EhV(o)V1 exhibited almost identical dependence of ATP hydrolysis activity on sodium ion and ATP concentrations, indicating their functional equivalence. In a single-molecule rotation assay with a low load probe at high ATP concentration, EhV(o)V1 only showed the "clear" state without apparent backward steps, whereas EhV1 showed two states, "clear" and "unclear." Furthermore, EhV(o)V1 showed slower rotation than EhV1 without the three distinct pauses separated by 120° that were observed in EhV1. When using a large probe, EhV(o)V1 showed faster rotation than EhV1, and the torque of EhV(o)V1 estimated from the continuous rotation was nearly double that of EhV1. On the other hand, stepping torque of EhV1 in the clear state was comparable with that of EhV(o)V1. These results indicate that rotor-stator interactions of the V(o) moiety and/or sodium ion transport limit the rotation driven by the V1 moiety, and the rotor-stator interactions in EhV(o)V1 are stabilized by two peripheral stalks to generate a larger torque than that of isolated EhV1. However, the torque value was substantially lower than that of other rotary ATPases, implying the low energy conversion efficiency of EhV(o)V1.

Indexed as

Adenosine TriphosphateCatalysisEnterococcusEscherichia coliHydrolysisKineticsMolecular Motor ProteinsRecombinant ProteinsSodiumThermus thermophilusTorqueVacuolar Proton-Translocating ATPasesAdenosine TriphosphateMolecular Motor ProteinsRecombinant ProteinsSodiumVacuolar Proton-Translocating ATPasesBioenergeticsMembrane ProteinMolecular MotorSingle-molecule BiophysicsVacuolar ATPaseV-ATPase

Identifiers

PMID25258315
PMCPMC4223323
OpenAlexW2075909441

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.