Evidence map›Paper›PMID 25258313›Full record

ArticleThe Journal of biological chemistry2014

Structural insights into activation of the retinal L-type Ca²⁺ channel (Cav1.4) by Ca²⁺-binding protein 4 (CaBP4).

Saebomi Park, Congmin Li, Françoise Haeseleer, Krzysztof Palczewski, James B Ames

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Molecular basis for a CaThe Journal of biological chemistry · 2026
    Article
  2. Review
  3. Unusual OCT findings in a patient with CABP4-associated cone-rod synaptic disorder.Documenta ophthalmologica. Advances in ophthalmology · 2024
    Article
  4. Calmodulin promotes a CaFEBS letters · 2022
    Article
  5. A novel missense creatine mutant ofTranslational pediatrics · 2022
    Article
  6. Article
  7. Cav1.4 dysfunction and congenital stationary night blindness type 2.Pflugers Archiv : European journal of physiology · 2021
    Review
  8. Review
  9. Calcium Sensors in Neuronal Function and Dysfunction.Cold Spring Harbor perspectives in biology · 2019
    Review
  10. Review
  11. Channeling Vision: CaBioMed research international · 2018
    Review
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Saebomi ParkFrom the Department of Chemistry, University of California, Davis, California 95616.
Congmin LiFrom the Department of Chemistry, University of California, Davis, California 95616.
Françoise Haeseleerthe Department of Physiology and Biophysics, University of Washington, Seattle, Washington 98195, and.
Krzysztof Palczewskithe Department of Pharmacology, Cleveland Center for Membrane and Structural Biology, School of Medicine, Case Western Reserve University, Cleveland, Ohio 44106-4965.
James B AmesFrom the Department of Chemistry, University of California, Davis, California 95616, jbames@ucdavis.edu.

Funding

Vision Research CoreP30EY001730 · NEI · UNIVERSITY OF WASHINGTON · PI JAMES Bryant HURLEY · 1985 to 2026
$23.5M
MEMBRANE TARGETING CALCIUM SENSORS IN VISIONR01EY012347 · NEI · UNIVERSITY OF MD BIOTECHNOLOGY INSTITUTE · PI AMES, JAMES B · 1999 to 2023
$6.9M
Regulation of L-type calcium channels by CaBP4R01EY020850 · NEI · UNIVERSITY OF WASHINGTON · PI HAESELEER, FRANCOISE J · 2010 to 2014
$1.6M
ACQUISITION OF 500 MHZ NMR SPECTROMETERS10RR011973 · NCRR · UNIVERSITY OF CALIFORNIA DAVIS · PI LA MAR, GERD N · 1997 to 1997
–
NCRR NIH HHS S10 RR011973NEI NIH HHS EY012347NEI NIH HHS EY020850NEI NIH HHS P30 EY001730NEI NIH HHS R01 EY012347NEI NIH HHS R01 EY020850
6 · The paper itself

Abstract

CaBP4 modulates Ca(2+)-dependent activity of L-type voltage-gated Ca(2+) channels (Cav1.4) in retinal photoreceptor cells. Mg(2+) binds to the first and third EF-hands (EF1 and EF3), and Ca(2+) binds to EF1, EF3, and EF4 of CaBP4. Here we present NMR structures of CaBP4 in both Mg(2+)-bound and Ca(2+)-bound states and model the CaBP4 structural interaction with Cav1.4. CaBP4 contains an unstructured N-terminal region (residues 1-99) and four EF-hands in two separate lobes. The N-lobe consists of EF1 and EF2 in a closed conformation with either Mg(2+) or Ca(2+) bound at EF1. The C-lobe binds Ca(2+) at EF3 and EF4 and exhibits a Ca(2+)-induced closed-to-open transition like that of calmodulin. Exposed residues in Ca(2+)-bound CaBP4 (Phe(137), Glu(168), Leu(207), Phe(214), Met(251), Phe(264), and Leu(268)) make contacts with the IQ motif in Cav1.4, and the Cav1.4 mutant Y1595E strongly impairs binding to CaBP4. We conclude that CaBP4 forms a collapsed structure around the IQ motif in Cav1.4 that we suggest may promote channel activation by disrupting an interaction between IQ and the inhibitor of Ca(2+)-dependent inactivation domain.

Indexed as

Amino Acid MotifsAmino Acid SequenceAnimalsCalciumCalcium-Binding ProteinsCalcium ChannelsCalcium Channels, L-TypeCalmodulinCalorimetryHumansMagnesiumMagnetic Resonance SpectroscopyMiceModels, MolecularMolecular Sequence DataMutationCABP4 protein, humanCabp4 protein, mouseCACNA1F protein, humanCacna1f protein, mouseCalciumCalcium-Binding ProteinsCalcium ChannelsCalcium Channels, L-TypeCalmodulinMagnesiumNerve Tissue ProteinsNeurotransmitter AgentsCalciumCalcium-binding ProteinCalcium ChannelCalmodulin (CaM)CalorimetryNuclear Magnetic Resonance (NMR)PhotoreceptorPhototransductionStructural Biology

Identifiers

PMID25258313
PMCPMC4223327

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.