Evidence map›Paper›PMID 25258312›Full record

ArticleThe Journal of biological chemistry2014

DEPTOR is a stemness factor that regulates pluripotency of embryonic stem cells.

Pooja Agrawal, Joseph Reynolds, Shereen Chew, Deepak A Lamba, Robert E Hughes

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 37 citations in OpenAlex.

  1. Trial
  2. Spatial dynamics of mTOR pathway activity during bovine embryo development.Frontiers in cell and developmental biology · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. The Interaction ofCells · 2022
    Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Role of mTOR Complexes in Neurogenesis.International journal of molecular sciences · 2018
    Review
  15. mTOR signaling in stem and progenitor cells.Development (Cambridge, England) · 2018
    Review
  16. Article
  17. Deptor: not only a mTOR inhibitor.Journal of experimental & clinical cancer research : CR · 2017
    Review
  18. mTOR-Dependent Cell Proliferation in the Brain.BioMed research international · 2017
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Pooja AgrawalBuck Institute for Research on Aging, Novato, California 94945 and.
Joseph ReynoldsBuck Institute for Research on Aging, Novato, California 94945 and.
Shereen ChewBuck Institute for Research on Aging, Novato, California 94945 and.
Deepak A LambaBuck Institute for Research on Aging, Novato, California 94945 and; Department of Ophthalmology, University of Washington, Seattle, Washington 98104. Electronic address: dlamba@buckinstitute.org.
Robert E HughesBuck Institute for Research on Aging, Novato, California 94945 and.
Buck Institute for Research on Aging · USUniversity of Washington · US

Funding

Protein Interactions and Protein Conformation in Aging and Disease (6 of 11)RL1GM084432 · NIGMS · BUCK INSTITUTE FOR RESEARCH ON AGING · PI HUGHES, ROBERT E · 2007 to 2011
$2.4M
NIGMS NIH HHS RL1 GM084432
6 · The paper itself

Abstract

The mammalian target of rapamycin (mTOR) pathway regulates stem cell regeneration and differentiation in response to growth factors, nutrients, cellular energetics, and various extrinsic stressors. Inhibition of mTOR activity has been shown to enhance the regenerative potential of pluripotent stem cells. DEPTOR is the only known endogenous inhibitor of all known cellular mTOR functions. We show that DEPTOR plays a key role in maintaining stem cell pluripotency by limiting mTOR activity in undifferentiated embryonic stem cells (ESCs). DEPTOR levels dramatically decrease with differentiation of mouse ESCs, and knockdown of DEPTOR is sufficient to promote ESC differentiation. A strong decrease in DEPTOR expression is also observed during human ESCs differentiation. Furthermore, reduction in DEPTOR level during differentiation is accompanied by a corresponding increase in mTOR complex 1 activity in mouse ESCs. Our data provide evidence that DEPTOR is a novel stemness factor that promotes pluripotency and self-renewal in ESCs by inhibiting mTOR signaling.

Indexed as

Adaptor Proteins, Signal TransducingAnimalsCell DifferentiationCell LineEmbryonic Stem CellsHEK293 CellsHumansIntracellular Signaling Peptides and ProteinsMiceNeurogenesisOctamer Transcription Factor-3Pluripotent Stem CellsPromoter Regions, GeneticSignal TransductionStem CellsTOR Serine-Threonine KinasesAdaptor Proteins, Signal TransducingAKT1S1 protein, humanDEPTOR protein, humanIntracellular Signaling Peptides and ProteinsMTOR protein, humanOctamer Transcription Factor-3POU5F1 protein, humanTOR Serine-Threonine KinasesTuberous Sclerosis Complex 2 ProteinTumor Suppressor ProteinsCell DifferentiationCell SignalingEmbryonic Stem CellMammalian Target of Rapamycin (mTOR)Neurogenesis

Identifiers

PMID25258312
PMCPMC4231659
OpenAlexW2069460265

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.