ArticleMicrobial ecology2015
Spatiotemporal analysis of bacterial diversity in sediments of Sundarbans using parallel 16S rRNA gene tag sequencing.
Article in Microbial ecology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.
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Who cites it
31 citing papers in PubMed, 89 citations in OpenAlex.
- Prokaryotic co-occurrence patterns in diverse Indian mangrove ecosystems.Scientific reports · 2025Article
- Anthropogenic disturbance selectively influences the rhizosphere archaeal communities of Sundarban mangroves, India.World journal of microbiology & biotechnology · 2025Article
- Metabarcoding reveals unique rhizospheric microbiomes of Rhizophora in Indian Mangroves.Folia microbiologica · 2025Article
- Bacterial Community Structure and Environmental Driving Factors in the Surface Sediments of Six Mangrove Sites from Guangxi, China.Microorganisms · 2024Article
- Do restoration strategies in mangroves recover microbial diversity? A case study in the Yucatan peninsula.PloS one · 2024Article
- Industrial and Pharmaceutical Applications of Microbial Diversity of Hypersaline Ecology from Lonar Soda Crater.Current pharmaceutical biotechnology · 2024Review
- Estuarine mangrove niches select cultivable heterotrophic diazotrophs with diverse metabolic potentials-a prospective cross-dialog for functional diazotrophy.Frontiers in microbiology · 2024Article
- Delving into the lifestyle of Sundarban Wetland resident, biofilm producing, halotolerant Salinicoccus roseus: a comparative genomics-based intervention.BMC genomics · 2023Article
- Isolation and Genomics ofMicrobiology spectrum · 2023Article
- Metagenomic insights into surface water microbial communities of a South Asian mangrove ecosystem.PeerJ · 2022Article
- Effect of mangrove restoration on sediment properties and bacterial community.Ecotoxicology (London, England) · 2021Article
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- Mangrove Sediment Microbiome: Adaptive Microbial Assemblages and Their Routed Biogeochemical Processes in Yunxiao Mangrove National Nature Reserve, China.Microbial ecology · 2019Article
- Spatial and temporal heterogeneity in the structure and function of sediment bacterial communities of a tropical mangrove forest.Environmental science and pollution research international · 2019Article
- Taxonomic diversity of bacteria from mangrove sediments of Goa: metagenomic and functional analysis.3 Biotech · 2018Article
- Community Structure, Dynamics and Interactions of Bacteria, Archaea and Fungi in Subtropical Coastal Wetland Sediments.Scientific reports · 2018Article
- Comparative mangrove metagenome reveals global prevalence of heavy metals and antibiotic resistome across different ecosystems.Scientific reports · 2018Article
- Draft Genome Sequence of Bioactive Strain Streptomyces sp. SMS_SU21, Isolated from Soil Sediment of the Sundarbans Mangrove Ecosystem.Genome announcements · 2018Article
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Authors and funding
13 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The influence of temporal and spatial variations on the microbial community composition was assessed in the unique coastal mangrove of Sundarbans using parallel 16S rRNA gene pyrosequencing. The total sediment DNA was extracted and subjected to the 16S rRNA gene pyrosequencing, which resulted in 117 Mbp of data from three experimental stations. The taxonomic analysis of the pyrosequencing data was grouped into 24 different phyla. In general, Proteobacteria were the most dominant phyla with predominance of Deltaproteobacteria, Alphaproteobacteria, and Gammaproteobacteria within the sediments. Besides Proteobacteria, there are a number of sequences affiliated to the following major phyla detected in all three stations in both the sampling seasons: Actinobacteria, Bacteroidetes, Planctomycetes, Acidobacteria, Chloroflexi, Cyanobacteria, Nitrospira, and Firmicutes. Further taxonomic analysis revealed abundance of micro-aerophilic and anaerobic microbial population in the surface layers, suggesting anaerobic nature of the sediments in Sundarbans. The results of this study add valuable information about the composition of microbial communities in Sundarbans mangrove and shed light on possible transformations promoted by bacterial communities in the sediments.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.