Evidence map›Paper›PMID 25256216›Full record

ArticleMolecules and cells2014

The unique mechanism of SNX9 BAR domain for inducing membrane tubulation.

Joohyun Park, Haiyan Zhao, Sunghoe Chang

Open access · diamondAbstract read
In one paragraph

Article in Molecules and cells, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 50% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Chlamydia-induced curvature of the host-cell plasma membrane is required for infection.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Joohyun ParkDepartment of Physiology and Biomedical Sciences, Seoul National University College of Medicine, Seoul 110-799, Korea ; Biomembrane Plasticity Research Center, Seoul National University College of Medicine, Seoul 110-799, Korea.
Haiyan ZhaoDepartment of Physiology and Biomedical Sciences, Seoul National University College of Medicine, Seoul 110-799, Korea.
Sunghoe ChangDepartment of Physiology and Biomedical Sciences, Seoul National University College of Medicine, Seoul 110-799, Korea ; Biomembrane Plasticity Research Center, Seoul National University College of Medicine, Seoul 110-799, Korea.
Seoul National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sorting nexin 9 (SNX9) is a member of the sorting nexin family of proteins and plays a critical role in clathrin-mediated endocytosis. It has a Bin-Amphiphysin-Rvs (BAR) domain which can form a crescent-shaped homodimer structure that induces deformation of the plasma membrane. While other BAR-domain containing proteins such as amphiphysin and endophilin have an amphiphatic helix in front of the BAR domain which plays a critical role in membrane penetration, SNX9 does not. Thus, whether and how SNX9 BAR domain could induce the deformation of the plasma membrane is not clear. The present study identified the internal putative amphiphatic stretch in the 1(st) α-helix of the SNX9 BAR domain and proved that together with the N-terminal helix (H0) region, this internal putative amphiphatic stretch is critical for inducing membrane tubulation. Therefore, our study shows that SNX9 uses a unique mechanism to induce the tubulation of the plasma membrane which mediates proper membrane deformation during clathrin-mediated endocytosis.

Indexed as

Adaptor Proteins, Signal TransducingAmino Acid SequenceAnimalsCell MembraneChlorocebus aethiopsClathrinCOS CellsEndocytosisHEK293 CellsHumansMolecular Sequence DataMutagenesis, Site-DirectedNerve Tissue ProteinsProtein Structure, TertiarySorting NexinsAdaptor Proteins, Signal TransducingamphiphysinClathrinNerve Tissue ProteinsSH3GL2 protein, humanSNX9 protein, humanSorting Nexinsamphiphatic helixBAR domainclathrin-mediated endocytosisinvaginationtubulation

Identifiers

PMID25256216
PMCPMC4213767
OpenAlexW1981091060

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.