Evidence map›Paper›PMID 25254383›Full record

ReviewViruses2014

Drug resistance in non-B subtype HIV-1: impact of HIV-1 reverse transcriptase inhibitors.

Kamalendra Singh, Jacqueline A Flores, Karen A Kirby, Ujjwal Neogi, Anders Sonnerborg, Atsuko Hachiya, Kalyan Das, Eddy Arnold, Carole McArthur, Michael Parniak and 1 more

Open access · goldAbstract readReview
In one paragraph

Review in Viruses, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Immune Control of HIV.Journal of life sciences (Westlake Village, Calif.) · 2019
    Article
  10. Article
  11. Review
  12. Observational
  13. Review
  14. Review
  15. Article
  16. A Phylogenetic Analysis of Human Immunodeficiency Virus Type 1 Sequences in Kiev: Findings Among Key Populations.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2017
    Article
  17. Observational
  18. Article
  19. Article
  20. Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 3 countries.

Kamalendra SinghChristopher Bond Life Sciences Center, University of Missouri, Columbia, MO 65211, USA. singhka@missouri.edu.
Jacqueline A FloresChristopher Bond Life Sciences Center, University of Missouri, Columbia, MO 65211, USA. jaf468@mail.missouri.edu.
Karen A KirbyChristopher Bond Life Sciences Center, University of Missouri, Columbia, MO 65211, USA. kirbyk@missouri.edu.
Ujjwal NeogiDivision of Clinical Microbiology, Department of Laboratory Medicine, Karolinska Institute, Stockholm 141 86, Sweden. ujjwal.neogi@ki.se.
Anders SonnerborgDivision of Clinical Microbiology, Department of Laboratory Medicine, Karolinska Institute, Stockholm 141 86, Sweden. Anders.Sonnerborg@ki.se.
Atsuko HachiyaClinical Research Center, Department of Infectious Diseases and Immunology, National Hospital Organization, Nagoya Medical Center, Nagoya 460-0001, Japan. hachiya@mail-nmc.jp.
Kalyan DasCenter for Advanced Biotechnology and Medicine, Rutgers University, Piscataway, NJ 08854, USA. kalyan@cabm.rutgers.edu.
Eddy ArnoldCenter for Advanced Biotechnology and Medicine, Rutgers University, Piscataway, NJ 08854, USA. arnold@cabm.rutgers.edu.
Carole McArthurDepartment of Oral and Craniofacial Science , School of Dentistry, University of Missouri, Kansas City, MO 64108, USA. McArthurC@umkc.edu.
Michael ParniakDepartment of Microbiology and Molecular Genetics, University of Pittsburgh School of Medicine, Pittsburgh, PA 15219, USA. map167@pitt.edu.
Stefan G SarafianosChristopher Bond Life Sciences Center, University of Missouri, Columbia, MO 65211, USA. sarafianoss@missouri.edu.
University of Missouri · USKarolinska Institutet · SERutgers, The State University of New Jersey · USNagoya Medical Center · JPUniversity of Missouri–Kansas City · USUniversity of Pittsburgh · US

Funding

Project 9P50GM103368 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI ARNOLD, EDWARD · 2012 to 2016
$20.0M
STRUCTURES OF HIV REVERSE TRANSCRIPTASE WITH SUBSTRATESR37AI027690 · NIAID · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI ARNOLD, EDWARD · 1999 to 2018
$14.4M
Ultrapotent Inhibitors of Wild-type and Multi-drug Resistant HIVR01AI076119 · NIAID · UNIVERSITY OF MISSOURI-COLUMBIA · PI SARAFIANOS, STEFAN G · 2008 to 2018
$4.1M
Hepatitis C antivirals: Mechanism of action, combination efficacy and resistanceR01AI099284 · NIAID · ROCKEFELLER UNIVERSITY · PI RICE, CHARLES M · 2012 to 2016
$3.6M
Ultrapotent Inhibitors of Wild-type and Multi-drug Resistant HIVR37AI076119 · NIAID · EMORY UNIVERSITY · PI Stefan G Sarafianos · 2020 to 2026
$3.6M
Novel antivirals targeting the RNase H activity of HIV reverse transcriptaseR01AI100890 · NIAID · UNIVERSITY OF MISSOURI-COLUMBIA · PI SARAFIANOS, STEFAN G, WANG, ZHENGQIANG · 2012 to 2016
$3.6M
Microbicide properties of RT inhibitor combinationsR33AI079801 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI PARNIAK, MICHAEL A · 2010 to 2012
$1.4M
Microbicide properties of RT inhibitor combinationsR21AI079801 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI PARNIAK, MICHAEL A · 2008 to 2009
$421k
Capsid-Targeting Small Molecules Blocking HIV through Novel Mechanism of ActionR21AI112417 · NIAID · UNIVERSITY OF MISSOURI-COLUMBIA · PI SARAFIANOS, STEFAN G · 2014 to 2015
$414k
NIAID NIH HHS AI079801NIAID NIH HHS AI099284NIAID NIH HHS AI100890NIAID NIH HHS AI112417NIAID NIH HHS R01 AI076119NIAID NIH HHS R01 AI099284NIAID NIH HHS R01 AI100890NIAID NIH HHS R21 AI079801NIAID NIH HHS R21 AI112417NIAID NIH HHS R33 AI079801NIAID NIH HHS R37 AI027690NIAID NIH HHS R37 AI076119NIAID NIH HHS R37 AI27690NIGMS NIH HHS GM103368NIGMS NIH HHS P50 GM 103368NIGMS NIH HHS P50 GM103368
6 · The paper itself

Abstract

Human immunodeficiency virus (HIV) causes approximately 2.5 million new infections every year, and nearly 1.6 million patients succumb to HIV each year. Several factors, including cross-species transmission and error-prone replication have resulted in extraordinary genetic diversity of HIV groups. One of these groups, known as group M (main) contains nine subtypes (A-D, F-H and J-K) and causes ~95% of all HIV infections. Most reported data on susceptibility and resistance to anti-HIV therapies are from subtype B HIV infections, which are prevalent in developed countries but account for only ~12% of all global HIV infections, whereas non-B subtype HIV infections that account for ~88% of all HIV infections are prevalent primarily in low and middle-income countries. Although the treatments for subtype B infections are generally effective against non-B subtype infections, there are differences in response to therapies. Here, we review how polymorphisms, transmission efficiency of drug-resistant strains, and differences in genetic barrier for drug resistance can differentially alter the response to reverse transcriptase-targeting therapies in various subtypes.

Indexed as

GenotypeAnti-HIV AgentsDrug Resistance, ViralHIV-1HIV InfectionsHumansMutationPolymorphism, GeneticReverse Transcriptase InhibitorsAnti-HIV AgentsReverse Transcriptase Inhibitors

Identifiers

PMID25254383
PMCPMC4189038
OpenAlexW2130343717

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.