Evidence map›Paper›PMID 25253887›Full record

ArticlePlant physiology2014

The mitochondrial protein import component, TRANSLOCASE OF THE INNER MEMBRANE17-1, plays a role in defining the timing of germination in Arabidopsis.

Yan Wang, Simon R Law, Aneta Ivanova, Olivier van Aken, Szymon Kubiszewski-Jakubiak, Vindya Uggalla, Margaretha van der Merwe, Owen Duncan, Reena Narsai, James Whelan and 1 more

Open access · greenAbstract read
In one paragraph

Article in Plant physiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.3field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
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  4. Article
  5. Review
  6. Article
  7. Conserved and Opposite Transcriptome Patterns during Germination inInternational journal of molecular sciences · 2020
    Article
  8. Linking mitochondrial and chloroplast retrograde signalling in plants.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Review
  9. Article
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  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Yan WangDepartment of Botany, School of Life Science, Australian Research Council Centre of Excellence in Plant Energy Biology, La Trobe University, Bundoora, Victoria 3086, Australia (Y.W., S.R.L., A.I., R.N., J.W.); andAustralian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia (O.v.A, S.K.-J., V.U., M.v.d.M., O.D., M.W.M.).
Simon R LawDepartment of Botany, School of Life Science, Australian Research Council Centre of Excellence in Plant Energy Biology, La Trobe University, Bundoora, Victoria 3086, Australia (Y.W., S.R.L., A.I., R.N., J.W.); andAustralian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia (O.v.A, S.K.-J., V.U., M.v.d.M., O.D., M.W.M.).
Aneta IvanovaDepartment of Botany, School of Life Science, Australian Research Council Centre of Excellence in Plant Energy Biology, La Trobe University, Bundoora, Victoria 3086, Australia (Y.W., S.R.L., A.I., R.N., J.W.); andAustralian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia (O.v.A, S.K.-J., V.U., M.v.d.M., O.D., M.W.M.).
Olivier van AkenDepartment of Botany, School of Life Science, Australian Research Council Centre of Excellence in Plant Energy Biology, La Trobe University, Bundoora, Victoria 3086, Australia (Y.W., S.R.L., A.I., R.N., J.W.); andAustralian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia (O.v.A, S.K.-J., V.U., M.v.d.M., O.D., M.W.M.).
Szymon Kubiszewski-JakubiakDepartment of Botany, School of Life Science, Australian Research Council Centre of Excellence in Plant Energy Biology, La Trobe University, Bundoora, Victoria 3086, Australia (Y.W., S.R.L., A.I., R.N., J.W.); andAustralian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia (O.v.A, S.K.-J., V.U., M.v.d.M., O.D., M.W.M.).
Vindya UggallaDepartment of Botany, School of Life Science, Australian Research Council Centre of Excellence in Plant Energy Biology, La Trobe University, Bundoora, Victoria 3086, Australia (Y.W., S.R.L., A.I., R.N., J.W.); andAustralian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia (O.v.A, S.K.-J., V.U., M.v.d.M., O.D., M.W.M.).
Margaretha van der MerweDepartment of Botany, School of Life Science, Australian Research Council Centre of Excellence in Plant Energy Biology, La Trobe University, Bundoora, Victoria 3086, Australia (Y.W., S.R.L., A.I., R.N., J.W.); andAustralian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia (O.v.A, S.K.-J., V.U., M.v.d.M., O.D., M.W.M.).
Owen DuncanDepartment of Botany, School of Life Science, Australian Research Council Centre of Excellence in Plant Energy Biology, La Trobe University, Bundoora, Victoria 3086, Australia (Y.W., S.R.L., A.I., R.N., J.W.); andAustralian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia (O.v.A, S.K.-J., V.U., M.v.d.M., O.D., M.W.M.).
Reena NarsaiDepartment of Botany, School of Life Science, Australian Research Council Centre of Excellence in Plant Energy Biology, La Trobe University, Bundoora, Victoria 3086, Australia (Y.W., S.R.L., A.I., R.N., J.W.); andAustralian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia (O.v.A, S.K.-J., V.U., M.v.d.M., O.D., M.W.M.).
James WhelanDepartment of Botany, School of Life Science, Australian Research Council Centre of Excellence in Plant Energy Biology, La Trobe University, Bundoora, Victoria 3086, Australia (Y.W., S.R.L., A.I., R.N., J.W.); andAustralian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia (O.v.A, S.K.-J., V.U., M.v.d.M., O.D., M.W.M.).
Monika W MurchaDepartment of Botany, School of Life Science, Australian Research Council Centre of Excellence in Plant Energy Biology, La Trobe University, Bundoora, Victoria 3086, Australia (Y.W., S.R.L., A.I., R.N., J.W.); andAustralian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia (O.v.A, S.K.-J., V.U., M.v.d.M., O.D., M.W.M.) monika.murcha@uwa.edu.au.ORCID http://orcid.org/0000-0002-3689-6158
Australian Research Council · AULa Trobe University · AUUniversity of Western Australia · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In Arabidopsis (Arabidopsis thaliana), small gene families encode multiple isoforms for many of the components of the mitochondrial protein import apparatus. There are three isoforms of the TRANSLOCASE OF THE INNER MEMBRANE17 (Tim17). Transcriptome analysis indicates that AtTim17-1 is only detectable in dry seed. In this study, two independent transfer DNA insertional mutant lines of tim17-1 exhibited a germination-specific phenotype, showing a significant increase in the rate of germination. Microarray analyses revealed that Attim17-1 displayed alterations in the temporal sequence of transcriptomic events during germination, peaking earlier compared with the wild type. Promoter analysis of AtTim17-1 further identified an abscisic acid (ABA)-responsive element, which binds ABA-responsive transcription factors, acting to repress the expression of AtTim17-1. Attim17-1 dry seeds contained significantly increased levels of ABA and gibberellin, 2- and 5-fold, respectively. These results support the model that mitochondrial biogenesis is regulated in a tight temporal sequence of events during germination and that altering mitochondrial biogenesis feeds back to alter the germination rate, as evidenced by the altered levels of the master regulatory hormones that define germination.

Indexed as

Abscisic AcidArabidopsisArabidopsis ProteinsGene Expression Regulation, PlantGene Knockout TechniquesGerminationGibberellinsMembrane Transport ProteinsMitochondriaMitochondrial Precursor Protein Import Complex ProteinsMutationPromoter Regions, GeneticProtein IsoformsSeedsTime FactorsAbscisic AcidArabidopsis ProteinsGibberellinsMembrane Transport ProteinsMitochondrial Precursor Protein Import Complex ProteinsProtein IsoformsTIM17 protein, Arabidopsis

Identifiers

PMID25253887
PMCPMC4224734
OpenAlexW2168054507

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.