Evidence map›Paper›PMID 25253690›Full record

ArticleThe Journal of biological chemistry2014

Interactions between metal-binding domains modulate intracellular targeting of Cu(I)-ATPase ATP7B, as revealed by nanobody binding.

Yiping Huang, Sergiy Nokhrin, Gholamreza Hassanzadeh-Ghassabeh, Corey H Yu, Haojun Yang, Amanda N Barry, Marco Tonelli, John L Markley, Serge Muyldermans, Oleg Y Dmitriev and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.8field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 39 citations in OpenAlex.

  1. Review
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  8. Mutation spectrum ofMolecular genetics and metabolism reports · 2022
    Article
  9. Review
  10. Article
  11. Review
  12. Article
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  15. Article
  16. Review
  17. Article
  18. The six metal binding domains in human copper transporter, ATP7B: molecular biophysics and disease-causing mutations.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2017
    Review
  19. Article
  20. Disease-causing point-mutations in metal-binding domains of Wilson disease protein decrease stability and increase structural dynamics.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 3 countries.

Yiping HuangFrom the Department of Physiology, Johns Hopkins University School of Medicine, Baltimore, Maryland 21205.
Sergiy Nokhrinthe Department of Biochemistry, University of Saskatchewan, Saskatoon, Saskatchewan S7N 5E5, Canada.
Gholamreza Hassanzadeh-Ghassabehthe Vrije Universiteit Brussel, Structural Biology Research Center, and Nanobody Service Facility, VIB, 1050 Brussels, Belgium, and.
Corey H Yuthe Department of Biochemistry, University of Saskatchewan, Saskatoon, Saskatchewan S7N 5E5, Canada.
Haojun YangFrom the Department of Physiology, Johns Hopkins University School of Medicine, Baltimore, Maryland 21205.
Amanda N BarryFrom the Department of Physiology, Johns Hopkins University School of Medicine, Baltimore, Maryland 21205.
Marco Tonellithe Department of Biochemistry, National Magnetic Resonance Facility at Madison, University of Wisconsin-Madison, Madison, Wisconsin 53706.
John L Markleythe Department of Biochemistry, National Magnetic Resonance Facility at Madison, University of Wisconsin-Madison, Madison, Wisconsin 53706.
Serge Muyldermansthe Vrije Universiteit Brussel, Structural Biology Research Center, and.
Oleg Y Dmitrievthe Department of Biochemistry, University of Saskatchewan, Saskatoon, Saskatchewan S7N 5E5, Canada, Oleg.Dmitriev@usask.ca.
Svetlana LutsenkoFrom the Department of Physiology, Johns Hopkins University School of Medicine, Baltimore, Maryland 21205, Lutsenko@jhmi.edu.
Johns Hopkins Medicine · USUniversity of Saskatchewan · CAUniversity of Wisconsin–Madison · USJohns Hopkins University · USVIB-VUB Center for Structural Biology · BEVrije Universiteit Brussel · BE

Funding

The role of transferrin receptor 2 in iron homeostasisP01GM067166 · NIGMS · OREGON HEALTH & SCIENCE UNIVERSITY · PI UNGER, VINZENZ · 2003 to 2013
$14.6M
TR&D 3: TECHNOLOGY DEVELOPMENT FOR NMR STUDIES OF SMALL MOLECULES (METABOLOMICS, NATURAL PRODUCTS, METABOLITE-PROTEIN INTERACTIONS) pp.537-585 P41GM103399 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI MARKLEY, JOHN LUTE · 2012 to 2019
$9.4M
CIHRNIGMS NIH HHS GM067166NIGMS NIH HHS P01 GM067166NIGMS NIH HHS P41 GM103399
6 · The paper itself

Abstract

The biologically and clinically important membrane transporters are challenging proteins to study because of their low level of expression, multidomain structure, and complex molecular dynamics that underlies their activity. ATP7B is a copper transporter that traffics between the intracellular compartments in response to copper elevation. The N-terminal domain of ATP7B (N-ATP7B) is involved in binding copper, but the role of this domain in trafficking is controversial. To clarify the role of N-ATP7B, we generated nanobodies that interact with ATP7B in vitro and in cells. In solution NMR studies, nanobodies revealed the spatial organization of N-ATP7B by detecting transient functionally relevant interactions between metal-binding domains 1-3. Modulation of these interactions by nanobodies in cells enhanced relocalization of the endogenous ATP7B toward the plasma membrane linking molecular and cellular dynamics of the transporter. Stimulation of ATP7B trafficking by nanobodies in the absence of elevated copper provides direct evidence for the important role of N-ATP7B structural dynamics in regulation of ATP7B localization in a cell.

Indexed as

Adenosine TriphosphatasesAmino Acid SequenceAnimalsBinding SitesBlotting, WesternCamelids, New WorldCation Transport ProteinsCell MembraneCopperCopper-Transporting ATPasesHEK293 CellsHumansLuminescent ProteinsMagnetic Resonance SpectroscopyMicroscopy, ConfocalModels, MolecularAdenosine TriphosphatasesATP7B protein, humanCation Transport ProteinsCopperCopper-Transporting ATPasesLuminescent ProteinsSingle-Domain AntibodiesATPaseCopperMembrane ProteinMembrane TraffickingNanobodyNuclear Magnetic Resonance (NMR)Protein Dynamic

Identifiers

PMID25253690
PMCPMC4239620
OpenAlexW1963931438

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.