Evidence map›Paper›PMID 25252269›Full record

ArticleThe New phytologist2015

The genetics of divergence and reproductive isolation between ecotypes of Panicum hallii.

David B Lowry, Kyle Hernandez, Samuel H Taylor, Eli Meyer, Tierney L Logan, Kerrie W Barry, Jarrod A Chapman, Daniel S Rokhsar, Jeremy Schmutz, Thomas E Juenger

Open access · hybridAbstract read
In one paragraph

Article in The New phytologist, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 67 citations in OpenAlex.

  1. Article
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  5. The Ecology of Hybrid Incompatibilities.Cold Spring Harbor perspectives in biology · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

David B LowryDepartment of Integrative Biology and Institute for Cellular and Molecular Biology, University of Texas at Austin, 1 University Station C0990, Austin, TX, 78712, USA; Division of Science and Environmental Policy, California State University, Monterey Bay, 100 Campus Center, Seaside, CA, 93955, USA.
Kyle Hernandez
Samuel H Taylor
Eli Meyer
Tierney L Logan
Kerrie W Barry
Jarrod A Chapman
Daniel S Rokhsar
Jeremy Schmutz
Thomas E Juenger
The University of Texas at Austin · USJoint Genome Institute · USCalifornia State University System · USHudsonAlpha Institute for Biotechnology · USUniversity of Chicago · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The process of plant speciation often involves the evolution of divergent ecotypes in response to differences in soil water availability between habitats. While the same set of traits is frequently associated with xeric/mesic ecotype divergence, it is unknown whether those traits evolve independently or if they evolve in tandem as a result of genetic colocalization either by pleiotropy or genetic linkage. The self-fertilizing C4 grass species Panicum hallii includes two major ecotypes found in xeric (var. hallii) or mesic (var. filipes) habitats. We constructed the first linkage map for P. hallii by genotyping a reduced representation genomic library of an F2 population derived from an intercross of var. hallii and filipes. We then evaluated the genetic architecture of divergence between these ecotypes through quantitative trait locus (QTL) mapping. Overall, we mapped QTLs for nine morphological traits that are involved in the divergence between the ecotypes. QTLs for five key ecotype-differentiating traits all colocalized to the same region of linkage group five. Leaf physiological traits were less divergent between ecotypes, but we still mapped five physiological QTLs. We also discovered a two-locus Dobzhansky-Muller hybrid incompatibility. Our study suggests that ecotype-differentiating traits may evolve in tandem as a result of genetic colocalization.

Indexed as

EcotypeGenetic VariationReproductive IsolationChromosome MappingCrosses, GeneticGenetic MarkersGenetics, PopulationHybridization, GeneticPanicumPhenotypePlant LeavesQuantitative Trait, HeritableQuantitative Trait LociSyntenyGenetic Markersadaptationdroughtecotypephysiologypleiotropyquantitative trait locus (QTL)reproductive isolation

Identifiers

PMID25252269
PMCPMC4265272
OpenAlexW2130546836

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.