Evidence map›Paper›PMID 25251389›Full record

ArticleMolecular endocrinology (Baltimore, Md.)2014

Maintenance of Pdx1 mRNA translation in islet β-cells during the unfolded protein response.

Andrew T Templin, Bernhard Maier, Sarah A Tersey, Masayuki Hatanaka, Raghavendra G Mirmira

Open access · bronzeAbstract read
In one paragraph

Article in Molecular endocrinology (Baltimore, Md.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

  1. Current Practice in Bicistronic IRES Reporter Use: A Systematic Review.International journal of molecular sciences · 2021
    Pooled it
  2. Review
  3. Article
  4. Article
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  8. Article
  9. Review
  10. Article
  11. ATF5 regulates β-cell survival during stress.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Andrew T TemplinDepartment of Cellular and Integrative Physiology (A.T.T., R.G.M.), Department of Pediatrics and the Herman B Wells Center for Pediatric Research (B.M., S.A.T., M.H., R.G.M.), Department of Biochemistry and Molecular Biology (R.G.M.), and Department of Medicine (R.G.M.), Indiana University School of Medicine, Indianapolis, Indiana 46202.
Bernhard Maier
Sarah A Tersey
Masayuki Hatanaka
Raghavendra G Mirmira
Indiana University School of MedicineIndiana University – Purdue University Indianapolis · US

Funding

Transcriptional Mechanisms Governing Beta Cell DifferentiationR01DK060581 · NIDDK · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI Raghavendra G Mirmira · 2002 to 2026
$8.5M
Chromatin Cofactors in Islet Development and FunctionR01DK083583 · NIDDK · INDIANA UNIVERSITY INDIANAPOLIS · PI MIRMIRA, RAGHAVENDRA G · 2010 to 2013
$1.2M
NIDDK NIH HHS R01 DK060581NIDDK NIH HHS R01 DK083583
6 · The paper itself

Abstract

In type 1 diabetes, proinflammatory cytokines secreted by infiltrating immune cells activate the unfolded protein response (UPR) in islet β-cells, which leads to attenuation of global mRNA translation. Under such conditions, privileged mRNAs required for adaptation to the prevailing stress are maintained in an actively translated state. Pdx1 is a β-cell transcription factor that is required for the adaptive UPR, but it is not known how translation of its mRNA is maintained under these conditions. To study translation, we established conditions in vitro with MIN6 cells and mouse islets and a mixture of proinflammatory cytokines (IL-1β, TNF-α, and IFN-γ) that mimicked the UPR conditions seen in type 1 diabetes. Cell extracts were then subjected to polyribosome profiling to monitor changes to mRNA occupancy by ribosomes. Similar to other privileged mRNAs (Atf4 and Chop), Pdx1 mRNA remained partitioned in actively translating polyribosomes under the UPR, whereas the mRNA encoding a proinsulin-processing enzyme (Cpe) and others partitioned into inactively translating monoribosomes. Bicistronic luciferase reporter analyses revealed that the distal portion of the 5'-untranslated region of mouse Pdx1 (between bp -105 to -280) contained elements that promoted translation under both normal and UPR conditions, and this region exhibited conserved sequences and secondary structure similar to those of other known internal ribosome entry sites. Our findings suggest that Pdx1 protein levels are maintained in the setting of the UPR, in part, through elements in the 5'-untranslated region that confer privileged mRNA translation in a 5'-7-methylguanylate cap-independent manner.

Indexed as

5' Untranslated RegionsAnimalsCell Line, TumorDiabetes Mellitus, Type 1Homeodomain ProteinsInsulin-Secreting CellsInterferon-gammaInterleukin-1betaIslets of LangerhansMiceMice, Inbred C57BLPolyribosomesProtein BiosynthesisRNA, MessengerTrans-ActivatorsTumor Necrosis Factor-alpha5' Untranslated RegionsHomeodomain ProteinsInterferon-gammaInterleukin-1betapancreatic and duodenal homeobox 1 proteinRNA, MessengerTrans-ActivatorsTumor Necrosis Factor-alpha

Identifiers

PMID25251389
PMCPMC4213362
OpenAlexW2011941113

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.