ReviewFrontiers in microbiology2014
Metagenomic insights into particles and their associated microbiota in a coastal margin ecosystem.
Review in Frontiers in microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
32 citing papers in PubMed.
- Rhizosphere Bacterial Communities of Two Coastal Halophytes Under Salinity-Flooding Stress.Plants (Basel, Switzerland) · 2026Article
- Monsoon-driven short-term temporal changes and geomorphological controls on bacterial community dynamics in Korean coastal lagoons.Frontiers in microbiology · 2026Article
- Suspended detrital particles support a distinct microbial ecosystem in Palmer Canyon, Antarctica, a coastal biological hotspot.Polar biology · 2025Article
- Subtropical coastal microbiome variations due to massive river runoff after a cyclonic event.Environmental microbiome · 2024Article
- Alteration in Community Dynamics ofMicroorganisms · 2023Article
- Biofilm-a Syntrophic Consortia of Microbial Cells: Boon or Bane?Applied biochemistry and biotechnology · 2023Review
- Marine biofilms: diversity, interactions and biofouling.Nature reviews. Microbiology · 2022Review
- Free-living and particle-attached bacterial community composition, assembly processes and determinants across spatiotemporal scales in a macrotidal temperate estuary.Scientific reports · 2022Article
- Genomic insights into versatile lifestyle of three new bacterial candidate phyla.Science China. Life sciences · 2022Article
- Making comparable measurements of bacterial respiration and production in the subtropical coastal waters.Marine life science & technology · 2022Article
- Linking lifestyle and foraging strategies of marine bacteria: selfish behaviour of particle-attached bacteria in the northern Adriatic Sea.Environmental microbiology reports · 2022Article
- Microbial Community Structure and Ecological Networks during Simulation of Diatom Sinking.Microorganisms · 2022Article
- Turnover in Life-Strategies Recapitulates Marine Microbial Succession Colonizing Model Particles.Frontiers in microbiology · 2022Article
- Diversity Distribution, Driving Factors and Assembly Mechanisms of Free-Living and Particle-Associated Bacterial Communities at a Subtropical Marginal Sea.Microorganisms · 2021Article
- Spatially resolved assembly, connectivity and structure of particle-associated and free-living bacterial communities in a high Arctic fjord.FEMS microbiology ecology · 2021Article
- Modelling Free-Living and Particle-Associated Bacterial Assemblages across the Deep and Hypoxic Lower St. Lawrence Estuary.mSphere · 2020Article
- How do Planktonic Particle Collection Methods Affect Bacterial Diversity Estimates and Community Composition in Oligo-, Meso- and Eutrophic Lakes?Frontiers in microbiology · 2020Article
- Functional Seasonality of Free-Living and Particle-Associated Prokaryotic Communities in the Coastal Adriatic Sea.Frontiers in microbiology · 2020Article
- Divulging diazotrophic bacterial community structure in Kuwait desert ecosystems and their N2-fixation potential.PloS one · 2019Article
- Genomic Signatures for Sedimentary Microbial Utilization of Phytoplankton Detritus in a Fast-Flowing Estuary.Frontiers in microbiology · 2019Article
Corrections and comments
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Authors and funding
3 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Our previously published research was one of the pioneering studies on the use of metagenomics to directly compare taxonomic and metabolic properties of aquatic microorganisms from different filter size-fractions. We compared size-fractionated water samples representing free-living and particle-attached communities from four diverse habitats in the Columbia River coastal margin, analyzing 12 metagenomes consisting of >5 million sequence reads (>1.6 Gbp). With predicted peptide and rRNA data we evaluated eukaryotic, bacterial and archaeal populations across size fractions and related their properties to attached and free-living lifestyles, and their potential roles in carbon and nutrient cycling. In this focused review, we expand our discussion on the use of high-throughput sequence data to relate microbial community structure and function to the origin, fate and transport of particulate organic matter (POM) in coastal margins. We additionally discuss the potential impact of the priming effect on organic matter cycling at the land-ocean interface, and build a case for the importance, in particle-rich estuaries and coastal margin waters, of microbial activities in low-oxygen microzones within particle interiors.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.