Evidence map›Paper›PMID 25249625›Full record

ArticleNucleic acids research2014

SSX2 is a novel DNA-binding protein that antagonizes polycomb group body formation and gene repression.

Morten Frier Gjerstorff, Mette Marie Relster, Katrine Buch Viden Greve, Jesper Bonnet Moeller, Daniel Elias, Jonas Nørrelund Lindgreen, Steffen Schmidt, Jan Mollenhauer, Bjørn Voldborg, Christina Bøg Pedersen and 3 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Article
  3. Self-Maintaining CD103Cancer immunology research · 2020
    Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. International journal of biological sciences · 2018
    Article
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  15. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Morten Frier GjerstorffDepartment of Cancer and Inflammation Research, University of Southern Denmark, Odense, DK-5000, Denmark mgjerstorff@health.sdu.dk.
Mette Marie RelsterDepartment of Cancer and Inflammation Research, University of Southern Denmark, Odense, DK-5000, Denmark.
Katrine Buch Viden GreveDepartment of Cancer and Inflammation Research, University of Southern Denmark, Odense, DK-5000, Denmark.
Jesper Bonnet MoellerDepartment of Cardiovascular and Renal Research, University of Southern Denmark, Odense, DK-5000, Denmark.
Daniel EliasDepartment of Cancer and Inflammation Research, University of Southern Denmark, Odense, DK-5000, Denmark.
Jonas Nørrelund LindgreenDepartment of Cancer and Inflammation Research, University of Southern Denmark, Odense, DK-5000, Denmark.
Steffen SchmidtDepartment of Cancer and Inflammation Research, University of Southern Denmark, Odense, DK-5000, Denmark The Lundbeckfonden Center of Excellence NanoCAN, University of Southern Denmark, Odense, DK-5000, Denmark.
Jan MollenhauerDepartment of Cancer and Inflammation Research, University of Southern Denmark, Odense, DK-5000, Denmark The Lundbeckfonden Center of Excellence NanoCAN, University of Southern Denmark, Odense, DK-5000, Denmark.
Bjørn VoldborgThe Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen, DK-2200, Denmark.
Christina Bøg PedersenDepartment of Cancer and Inflammation Research, University of Southern Denmark, Odense, DK-5000, Denmark.
Nadine Heidi BrückmannDepartment of Cancer and Inflammation Research, University of Southern Denmark, Odense, DK-5000, Denmark.
Niels Erik MøllegaardDepartment of Cellular and Molecular Medicine, University of Copenhagen, DK-2200, Denmark.
Henrik Jørn DitzelDepartment of Cancer and Inflammation Research, University of Southern Denmark, Odense, DK-5000, Denmark The Lundbeckfonden Center of Excellence NanoCAN, University of Southern Denmark, Odense, DK-5000, Denmark Department of Oncology, Odense University Hospital, Odense, DK-5000, Denmark.
University of Southern Denmark · DKLundbeck Foundation · DKNovo Nordisk Foundation · DKOdense University Hospital · DKUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Polycomb group (PcG) complexes regulate cellular identity through epigenetic programming of chromatin. Here, we show that SSX2, a germline-specific protein ectopically expressed in melanoma and other types of human cancers, is a chromatin-associated protein that antagonizes BMI1 and EZH2 PcG body formation and derepresses PcG target genes. SSX2 further negatively regulates the level of the PcG-associated histone mark H3K27me3 in melanoma cells, and there is a clear inverse correlation between SSX2/3 expression and H3K27me3 in spermatogenesis. However, SSX2 does not affect the overall composition and stability of PcG complexes, and there is no direct concordance between SSX2 and BMI1/H3K27me3 presence at regulated genes. This suggests that SSX2 antagonizes PcG function through an indirect mechanism, such as modulation of chromatin structure. SSX2 binds double-stranded DNA in a sequence non-specific manner in agreement with the observed widespread association with chromatin. Our results implicate SSX2 in regulation of chromatin structure and function.

Indexed as

Gene Expression Regulation, NeoplasticCell Line, TumorCell NucleusChromatinDNAEnhancer of Zeste Homolog 2 ProteinHistonesHumansMelanomaNeoplasm ProteinsPolycomb-Group ProteinsPolycomb Repressive Complex 1Polycomb Repressive Complex 2Repressor ProteinsSpermatogenesisBMI1 protein, humanChromatinDNAEnhancer of Zeste Homolog 2 ProteinEZH2 protein, humanHistonesNeoplasm ProteinsPolycomb-Group ProteinsPolycomb Repressive Complex 1Polycomb Repressive Complex 2Repressor Proteinssynovial sarcoma X breakpoint proteins

Identifiers

PMID25249625
PMCPMC4191419
OpenAlexW2112426764

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.