Evidence map›Paper›PMID 25248550›Full record

ArticleThe Plant cell2014

The small regulatory RNA SyR1/PsrR1 controls photosynthetic functions in cyanobacteria.

Jens Georg, Dennis Dienst, Nils Schürgers, Thomas Wallner, Dominik Kopp, Damir Stazic, Ekaterina Kuchmina, Stephan Klähn, Heiko Lokstein, Wolfgang R Hess and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 110 citations in OpenAlex.

  1. Environmental Adaptation inPlants (Basel, Switzerland) · 2026
    Review
  2. Article
  3. Very high CONAR genomics and bioinformatics · 2026
    Article
  4. Article
  5. Article
  6. Molecular Mechanisms ofPlants (Basel, Switzerland) · 2025
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. pSHDY: A New Tool for Genetic Engineering of Cyanobacteria.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Jens GeorgUniversity of Freiburg, Faculty of Biology, D-79104 Freiburg, Germany.
Dennis DienstHumboldt-University Berlin, Institute of Biology, 10115 Berlin, Germany.
Nils SchürgersUniversity of Freiburg, Faculty of Biology, D-79104 Freiburg, Germany.
Thomas WallnerUniversity of Freiburg, Faculty of Biology, D-79104 Freiburg, Germany.
Dominik KoppUniversity of Freiburg, Faculty of Biology, D-79104 Freiburg, Germany.
Damir StazicUniversity of Freiburg, Faculty of Biology, D-79104 Freiburg, Germany.
Ekaterina KuchminaUniversity of Freiburg, Faculty of Biology, D-79104 Freiburg, Germany.
Stephan KlähnUniversity of Freiburg, Faculty of Biology, D-79104 Freiburg, Germany.
Heiko LoksteinUniversity of Freiburg, Faculty of Biology, D-79104 Freiburg, Germany.
Wolfgang R HessUniversity of Freiburg, Faculty of Biology, D-79104 Freiburg, Germany.
Annegret WildeUniversity of Freiburg, Faculty of Biology, D-79104 Freiburg, Germany annegret.wilde@biologie.uni-freiburg.de.
University of Freiburg · DEHumboldt-Universität zu Berlin · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Little is known so far about RNA regulators of photosynthesis in plants, algae, or cyanobacteria. The small RNA PsrR1 (formerly SyR1) has been discovered in Synechocystis sp PCC 6803 and appears to be widely conserved within the cyanobacterial phylum. Expression of PsrR1 is induced shortly after a shift from moderate to high-light conditions. Artificial overexpression of PsrR1 led to a bleaching phenotype under moderate light growth conditions. Advanced computational target prediction suggested that several photosynthesis-related mRNAs could be controlled by PsrR1, a finding supported by the results of transcriptome profiling experiments upon pulsed overexpression of this small RNA in Synechocystis sp PCC 6803. We confirmed the interaction between PsrR1 and the ribosome binding regions of the psaL, psaJ, chlN, and cpcA mRNAs by mutational analysis in a heterologous reporter system. Focusing on psaL as a specific target, we show that the psaL mRNA is processed by RNase E only in the presence of PsrR1. Furthermore, we provide evidence for a posttranscriptional regulation of psaL by PsrR1 in the wild type at various environmental conditions and analyzed the consequences of PsrR1-based regulation on photosystem I. In summary, computational and experimental data consistently establish the small RNA PsrR1 as a regulatory factor controlling photosynthetic functions.

Indexed as

Photosynthesis5' Untranslated RegionsAmino Acid SequenceBacterial ProteinsBase SequenceEndoribonucleasesGene Expression Regulation, BacterialGenes, BacterialGenes, ReporterHalf-LifeMolecular Sequence DataMutationOligonucleotide Array Sequence AnalysisPhenotypePhylogenyProtein Binding5' Untranslated RegionsBacterial ProteinsEndoribonucleasesribonuclease ERNA, BacterialRNA, Messenger

Identifiers

PMID25248550
PMCPMC4213160
OpenAlexW2112689805

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.