Evidence map›Paper›PMID 25246529›Full record

ArticleThe Journal of biological chemistry2014

Nuclear factor-κB-inducing kinase (NIK) contains an amino-terminal inhibitor of apoptosis (IAP)-binding motif (IBM) that potentiates NIK degradation by cellular IAP1 (c-IAP1).

Sunhee Lee, Madhavi Challa-Malladi, Shawn B Bratton, Casey W Wright

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Sunhee LeeInstitute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, Texas 78712, and.
Madhavi Challa-MalladiInstitute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, Texas 78712, and.
Shawn B BrattonInstitute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, Texas 78712, and; Department of Molecular Carcinogenesis, The University of Texas MD Anderson Cancer Center, Science Park, Smithville, Texas 78957.
Casey W WrightInstitute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, Texas 78712, and; Center for Molecular and Cellular Toxicology in the Division of Pharmacology and Toxicology, College of Pharmacy and The University of Texas at Austin, Austin, Texas 78712. Electronic address: Cww@austin.utexas.edu.
The University of Texas at Austin · USNew York Hospital Queens · USThe University of Texas MD Anderson Cancer Center · US

Funding

Heat shock-induced apoptosisR01CA129521 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI BRATTON, SHAWN B · 2008 to 2012
$1.5M
Caspase-activating ComplexesR01GM096101 · NIGMS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI BRATTON, SHAWN B · 2011 to 2014
$1.2M
NCI NIH HHS CA129521NCI NIH HHS R01 CA129521NIGMS NIH HHS GM096101NIGMS NIH HHS R01 GM096101
6 · The paper itself

Abstract

Activation of the noncanonical NF-κB pathway hinges on the stability of the NF-κB-inducing kinase (NIK), which is kept at low levels basally by a protein complex consisting of the E3 ubiquitin ligases cellular inhibitor of apoptosis 1 and 2 (c-IAP1/2) proteins and the tumor necrosis factor receptor-associated factors 2 and 3 (TRAF2/3). NIK is brought into close proximity to the c-IAPs through a TRAF2-TRAF3 bridge where TRAF2 recruits c-IAP1/2 and TRAF3 binds to NIK. However, it is not clear how the c-IAPs specifically recognize and ubiquitylate NIK in the complex. We have identified an IAP-binding motif (IBM) at the amino terminus of NIK. IBMs are utilized by a number of proapoptotic proteins to antagonize IAP function. Here, we utilize mutational studies to demonstrate that wild-type NIK is destabilized in the presence of c-IAP1, whereas the NIK IBM mutant is stable. NIK interacts with the second baculovirus IAP repeat (BIR2) domain of c-IAP1 via the IBM, and this interaction, in turn, provides substrate recognition for c-IAP1 mediated ubiquitylation and degradation of NIK. Furthermore, in the presence of the NIK IBM mutant, we observed an elevated processing of p100 to p52 followed by increased expression of NF-κB target genes. Together, these findings reveal the novel identification and function of the NIK IBM, which promotes c-IAP1-dependent ubiquitylation of NIK, resulting in optimal NIK turnover to ensure that noncanonical NF-κB signaling is off in the absence of an activating signal.

Indexed as

ProteolysisBinding, CompetitiveEnzyme StabilityHEK293 CellsHumansInhibitor of Apoptosis ProteinsNF-kappaB-Inducing KinaseProtein Interaction Domains and MotifsProtein Serine-Threonine KinasesSignal TransductionUbiquitinationUbiquitin-Protein LigasesBIRC2 protein, humanInhibitor of Apoptosis ProteinsNF-kappaB-Inducing KinaseProtein Serine-Threonine KinasesUbiquitin-Protein Ligasesc-IAPE3 Ubiquitin LigaseIBMNF-kB Transcription FactorNIKTNF Receptor-associated Factor (TRAF)Ubiquitylation (Ubiquitination)X-linked Inhibitor Of Apoptosis Protein (XIAP)

Identifiers

PMID25246529
PMCPMC4215246
OpenAlexW2013902682

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.