Evidence map›Paper›PMID 25246524›Full record

ArticleThe Journal of biological chemistry2014

Human eukaryotic initiation factor 2 (eIF2)-GTP-Met-tRNAi ternary complex and eIF3 stabilize the 43 S preinitiation complex.

Masaaki Sokabe, Christopher S Fraser

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 64 citations in OpenAlex.

  1. Remodeling of mRNA by eIF4F in human translation initiation.bioRxiv : the preprint server for biology · 2026
    Article
  2. A ribosomal kinetic checkpoint governs selective mRNA recruitment.bioRxiv : the preprint server for biology · 2026
    Article
  3. Purification and characterization of recombinant human translation initiation factor eIF3.Protein science : a publication of the Protein Society · 2026
    Article
  4. Review
  5. Review
  6. eIF1 and eIF5 dynamically control translation start site fidelity.Nature structural & molecular biology · 2025
    Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. The Role of mCancers · 2022
    Review
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Masaaki SokabeDepartment of Molecular and Cellular Biology, College of Biological Sciences, University of California, Davis, California 95616.
Christopher S FraserDepartment of Molecular and Cellular Biology, College of Biological Sciences, University of California, Davis, California 95616. Electronic address: csfraser@ucdavis.edu.
University of California, Davis · US

Funding

The mechanism of mRNA recruitment to the human ribosome.R01GM092927 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI FRASER, CHRISTOPHER S · 2010 to 2022
$4.1M
NIGMS NIH HHS R01 GM092927
6 · The paper itself

Abstract

The formation of a stable 43 S preinitiation complex (PIC) must occur to enable successful mRNA recruitment. However, the contributions of eIF1, eIF1A, eIF3, and the eIF2-GTP-Met-tRNAi ternary complex (TC) in stabilizing the 43 S PIC are poorly defined. We have reconstituted the human 43 S PIC and used fluorescence anisotropy to systematically measure the affinity of eIF1, eIF1A, and eIF3j in the presence of different combinations of 43 S PIC components. Our data reveal a complicated network of interactions that result in high affinity binding of all 43 S PIC components with the 40 S subunit. Human eIF1 and eIF1A bind cooperatively to the 40 S subunit, revealing an evolutionarily conserved interaction. Negative cooperativity is observed between the binding of eIF3j and the binding of eIF1, eIF1A, and TC with the 40 S subunit. To overcome this, eIF3 dramatically increases the affinity of eIF1 and eIF3j for the 40 S subunit. Recruitment of TC also increases the affinity of eIF1 for the 40 S subunit, but this interaction has an important indirect role in increasing the affinity of eIF1A for the 40 S subunit. Together, our data provide a more complete thermodynamic framework of the human 43 S PIC and reveal important interactions between its components to maintain its stability.

Indexed as

AnisotropyEukaryotic Initiation Factor-2Eukaryotic Initiation Factor-3Guanosine TriphosphateHeLa CellsHumansKineticsProtein BindingProtein Interaction MappingProtein Structure, TertiaryRibosomesRibosome Subunits, Small, EukaryoticRNA InterferenceRNA, Transfer, MetSpectrometry, FluorescenceThermodynamicsEukaryotic Initiation Factor-2Eukaryotic Initiation Factor-3Guanosine TriphosphateRNA, Transfer, MetCooperativityeIF1eIF1AeIF2eIF3Eukaryotic Translation InitiationProtein-Protein InteractionRibosomeRibosome FunctionRNA-binding Protein

Identifiers

PMID25246524
PMCPMC4231660
OpenAlexW1978419881

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.