Evidence map›Paper›PMID 25245948›Full record

ArticleNucleic acids research2014

Tls1 regulates splicing of shelterin components to control telomeric heterochromatin assembly and telomere length.

Jiyong Wang, Xavier Tadeo, Haitong Hou, Stuart Andrews, James J Moresco, John R Yates, Peter L Nagy, Songtao Jia

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Jiyong WangDepartment of Biological Sciences, Columbia University, New York, NY, USA.
Xavier TadeoDepartment of Biological Sciences, Columbia University, New York, NY, USA.
Haitong HouDepartment of Biological Sciences, Columbia University, New York, NY, USA.
Stuart AndrewsDepartment of Pathology and Cell Biology, Columbia University College of Physicians and Surgeons, New York, NY, USA.
James J MorescoDepartment of Chemical Physiology, The Scripps Research Institute, La Jolla, CA, USA.
John R YatesDepartment of Chemical Physiology, The Scripps Research Institute, La Jolla, CA, USA.
Peter L NagyDepartment of Pathology and Cell Biology, Columbia University College of Physicians and Surgeons, New York, NY, USA.
Songtao JiaDepartment of Biological Sciences, Columbia University, New York, NY, USA sj2274@columbia.edu.
Columbia University · USScripps Research Institute · US

Funding

ZDS2P REGULATES SWE1P-DEPENDENT POLARIZED CELL GROWTH IN S CEREVISIAEP41RR011823 · NCRR · UNIVERSITY OF WASHINGTON · PI DAVIS, TRACY · 1996 to 2011
$24.7M
TrainingP41GM103533 · NIGMS · UNIVERSITY OF WASHINGTON · PI MACCOSS, MICHAEL · 2012 to 2021
$20.7M
Quantitative Proteome Analysis of Brain DevelopmentR01MH067880 · NIMH · SCRIPPS RESEARCH INSTITUTE, THE · PI YATES III, JOHN R · 2003 to 2017
$7.1M
Mechanism of heterochromatin assemblyR01GM085145 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI JIA, SONGTAO · 2008 to 2017
$3.0M
Pathogenesis of Neurodegenerative Diseases Caused by Mutations in SenataxinR01NS064253 · NINDS · UNIVERSITY OF IOWA · PI NAGY, PETER L · 2008 to 2011
$1.5M
NCRR NIH HHS P41 RR011823NHLBI NIH HHS HHSN268201000035CNIGMS NIH HHS P41 GM103533NIGMS NIH HHS R01 GM085145NIGMS NIH HHS R01-GM085145NIMH NIH HHS R01 MH067880NINDS NIH HHS R01-NS064253
6 · The paper itself

Abstract

Heterochromatin preferentially forms at repetitive DNA elements through RNAi-mediated targeting of histone-modifying enzymes. It was proposed that splicing factors interact with the RNAi machinery or regulate the splicing of repeat transcripts to directly participate in heterochromatin assembly. Here, by screening the fission yeast deletion library, we comprehensively identified factors required for telomeric heterochromatin assembly, including a novel gene tls1+. Purification of Tls1 and mass spectrometry analysis of its interacting proteins show that Tls1 associates with the spliceosome subunit Brr2. RNA sequencing analysis shows that the splicing of a subset of mRNAs are affected in tls1Δ cells, including mRNAs of shelterin components rap1+ and poz1+. Importantly, replacing rap1+ and poz1+ with their cDNAs significantly alleviated heterochromatin defects of tls1Δ cells, suggesting that the missplicing of shelterin components is the cause of such defects, and that splicing factors regulate telomeric heterochromatin through the proper splicing of heterochromatin factors. In addition to its role in telomeric heterochromatin assembly, Tls1-mediated splicing of shelterin mRNAs also regulates telomere length. Given that its human homologue C9ORF78 also associates with the spliceosome and is overexpressed in multiple cancer cell lines, our results suggest that C9ORF78 overexpression might alter the proper splicing of genes during cancer progression.

Indexed as

RNA SplicingTelomere HomeostasisHeterochromatinNuclear ProteinsRNA Splicing FactorsSchizosaccharomycesSchizosaccharomyces pombe ProteinsSpliceosomesTelomereTelomere-Binding ProteinsHeterochromatinNuclear ProteinsRNA Splicing FactorsSchizosaccharomyces pombe ProteinsTelomere-Binding ProteinsTls1 protein, S pombe

Identifiers

PMID25245948
PMCPMC4191416
OpenAlexW2135205460

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.