Evidence map›Paper›PMID 25243180›Full record

ReviewBioMed research international2014

Dynamic Alu methylation during normal development, aging, and tumorigenesis.

Yanting Luo, Xuemei Lu, Hehuang Xie

Open access · hybridAbstract readReview
In one paragraph

Review in BioMed research international, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed, 1 pooled it
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 1 synthesis or guideline pooled it, 99 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Benchmarking strategies for CNV calling from whole genome bisulfite data in humans.Computational and structural biotechnology journal · 2025
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Global DNA methylation patterns in Alcohol Use Disorder.Genetics and molecular biology · 2024
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Methylome-wide Association Study of Patients with Recent-onset Psychosis.Clinical psychopharmacology and neuroscience : the official scientific journal of the Korean College of Neuropsychopharmacology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 2 countries.

Yanting LuoBeijing Institute of Genomics, Chinese Academy of Sciences, Beijing 100101, China.ORCID 0000-0003-0439-6164
Xuemei LuBeijing Institute of Genomics, Chinese Academy of Sciences, Beijing 100101, China.
Hehuang XieBeijing Institute of Genomics, Chinese Academy of Sciences, Beijing 100101, China ; Epigenomics and Computational Biology Lab, Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA 24060, USA ; Department of Biological Sciences, Virginia Tech, Blacksburg, VA 24060, USA.ORCID 0000-0001-5739-1653
Chinese Academy of Sciences · CN

Funding

The epigenetic role of EGR1 during postnatal brain development and in neuronal activityR01NS094574 · NINDS · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI XIE, HEHUANG · 2016 to 2020
$1.7M
NINDS NIH HHS R01 NS094574
6 · The paper itself

Abstract

DNA methylation primarily occurs on CpG dinucleotides and plays an important role in transcriptional regulations during tissue development and cell differentiation. Over 25% of CpG dinucleotides in the human genome reside within Alu elements, the most abundant human repeats. The methylation of Alu elements is an important mechanism to suppress Alu transcription and subsequent retrotransposition. Decades of studies revealed that Alu methylation is highly dynamic during early development and aging. Recently, many environmental factors were shown to have a great impact on Alu methylation. In addition, aberrant Alu methylation has been documented to be an early event in many tumors and Alu methylation levels have been associated with tumor aggressiveness. The assessment of the Alu methylation has become an important approach for early diagnosis and/or prognosis of cancer. This review focuses on the dynamic Alu methylation during development, aging, and tumor genesis. The cause and consequence of Alu methylation changes will be discussed.

Indexed as

AgingAlu ElementsDNA MethylationCarcinogenesisFemaleHumansMale

Identifiers

PMID25243180
PMCPMC4163490
OpenAlexW2068910046

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.