Evidence map›Paper›PMID 25243132›Full record

ArticleBioMed research international2014

Crystal structure of Deinococcus radiodurans RecQ helicase catalytic core domain: the interdomain flexibility.

Sheng-Chia Chen, Chi-Hung Huang, Chia Shin Yang, Tzong-Der Way, Ming-Chung Chang, Yeh Chen

Abstract read
In one paragraph

Article in BioMed research international, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Structural features and functional implications of proteins enabling the robustness ofComputational and structural biotechnology journal · 2020
    Review
  4. Article
  5. A Decade of Biochemical and Structural Studies of the DNA Repair Machinery ofComputational and structural biotechnology journal · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Sheng-Chia ChenDepartment of Biotechnology, Hungkuang University, Taichung 433, Taiwan ; Taiwan Advance Biopharm (TABP), Inc., Xizhi City, New Taipei City 221, Taiwan.
Chi-Hung HuangDepartment of Biotechnology, Hungkuang University, Taichung 433, Taiwan ; Taiwan Advance Biopharm (TABP), Inc., Xizhi City, New Taipei City 221, Taiwan ; Institute of Biochemistry, National Chung-Hsing University, Taichung 40227, Taiwan.ORCID 0000-0002-8887-4962
Chia Shin YangDepartment of Biotechnology, Hungkuang University, Taichung 433, Taiwan ; Taiwan Advance Biopharm (TABP), Inc., Xizhi City, New Taipei City 221, Taiwan.
Tzong-Der WayDepartment of Biological Science and Technology, College of Life Sciences, China Medical University, Taichung 40402, Taiwan.
Ming-Chung ChangDepartment of Nutrition, Hungkuang University, Taichung 433, Taiwan.
Yeh ChenDepartment of Biotechnology, Hungkuang University, Taichung 433, Taiwan.ORCID 0000-0002-7740-0446

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

RecQ DNA helicases are key enzymes in the maintenance of genome integrity, and they have functions in DNA replication, recombination, and repair. In contrast to most RecQs, RecQ from Deinococcus radiodurans (DrRecQ) possesses an unusual domain architecture that is crucial for its remarkable ability to repair DNA. Here, we determined the crystal structures of the DrRecQ helicase catalytic core and its ADP-bound form, revealing interdomain flexibility in its first RecA-like and winged-helix (WH) domains. Additionally, the WH domain of DrRecQ is positioned in a different orientation from that of the E. coli RecQ (EcRecQ). These results suggest that the orientation of the protein during DNA-binding is significantly different when comparing DrRecQ and EcRecQ.

Indexed as

Catalytic DomainAdenosine DiphosphateAmino Acid SequenceCrystallography, X-RayDeinococcusMolecular Sequence DataRecQ HelicasesSequence AlignmentSequence Homology, Amino AcidStatic ElectricityStructural Homology, ProteinAdenosine DiphosphateRecQ Helicases

Identifiers

PMID25243132
PMCPMC4163472

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.