Evidence map›Paper›PMID 25242287›Full record

ArticleChemistry & biology2014

Mutational analysis of the quorum-sensing receptor LasR reveals interactions that govern activation and inhibition by nonlactone ligands.

Joseph P Gerdt, Christine E McInnis, Trevor L Schell, Francis M Rossi, Helen E Blackwell

Open access · greenAbstract read
In one paragraph

Article in Chemistry & biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Characterization of natural product inhibitors of quorum sensing inbioRxiv : the preprint server for biology · 2024
    Article
  5. Article
  6. ModifiedFrontiers in molecular biosciences · 2023
    Article
  7. Article
  8. Review
  9. Article
  10. Inhibitory Effects of Artificial Sweeteners on Bacterial Quorum Sensing.International journal of molecular sciences · 2021
    Article
  11. Growing emergence of drug-resistantIranian journal of basic medical sciences · 2021
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Structural determinants driving homoserine lactone ligand selection in theProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Joseph P GerdtDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.
Christine E McInnisDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.
Trevor L SchellDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.
Francis M RossiDepartment of Chemistry, SUNY Cortland, Cortland, NY 13045, USA.
Helen E BlackwellDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI 53706, USA. Electronic address: blackwell@chem.wisc.edu.
University of Wisconsin–Madison · USSUNY Cortland · US

Funding

Chemistry-Biology Interface Training ProgramT32GM008505 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI BLACKWELL, HELEN E. · 1993 to 2023
$9.8M
Synthetic Ligands for Modulating Bacterial CommunicationR01GM109403 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI BLACKWELL, HELEN E. · 2014 to 2017
$1.2M
NIGMS NIH HHS GM109403NIGMS NIH HHS R01 GM109403NIGMS NIH HHS T32 GM008505
6 · The paper itself

Abstract

Gram-negative bacteria use N-acyl L-homoserine lactone (AHL) quorum-sensing (QS) signals to regulate the expression of myriad phenotypes. Non-native AHL analogs can strongly attenuate QS receptor activity and thereby QS signaling; however, we currently lack a molecular understanding of the mechanisms by which most of these compounds elicit their agonistic or antagonistic profiles. In this study, we investigated the origins of striking activity profile switches (i.e., receptor activator to inhibitor, and vice versa) observed upon alteration of the lactone head group in certain AHL analogs. Reporter gene assays of mutant versions of the Pseudomonas aeruginosa QS receptor LasR revealed that interactions between the ligands and Trp60, Tyr56, and Ser129 govern whether these ligands behave as LasR activators or inhibitors. Using this knowledge, we propose a model for the modulation of LasR by AHL analogs-encompassing a subtly different interaction with the binding pocket to a global change in LasR conformation.

Indexed as

LigandsAnilidesBacterial ProteinsBenzeneacetamidesBinding SitesEscherichia coliMolecular Dynamics SimulationMutagenesis, Site-DirectedProtein Structure, TertiaryPseudomonas aeruginosaTrans-ActivatorsAnilidesBacterial ProteinsBenzeneacetamidesLasR protein, Pseudomonas aeruginosaLigandsTrans-Activators

Identifiers

PMID25242287
PMCPMC4224638
OpenAlexW2031700270

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.