Evidence map›Paper›PMID 25239901›Full record

ArticleApplied and environmental microbiology2014

Microbiota in the Throat and Risk Factors for Laryngeal Carcinoma.

Hongli Gong, Yi Shi, Xia Zhou, Chunping Wu, Pengyu Cao, Chen Xu, Dongsheng Hou, Yuezhu Wang, Liang Zhou

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
3.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 81 citations in OpenAlex.

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  12. The Human Microbiome-A Physiologic Perspective.Comprehensive Physiology · 2024
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  17. The relationship between the upper aerodigestive microbiome axis and head and neck cancers: it is time to bet on it?European archives of oto-rhino-laryngology : official journal of the European Federation of Oto-Rhino-Laryngological Societies (EUFOS) : affiliated with the German Society for Oto-Rhino-Laryngology - Head and Neck Surgery · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Hongli GongDepartment of Otolaryngology, Eye, Ear, Nose, and Throat Hospital of Fudan University, Shanghai, China.
Yi ShiDepartment of Clinical Laboratory, Shanghai Pudong Hospital, Fudan University Pudong Medical Center, Shanghai, China yishi750@163.com zhoulent@126.com.
Xia ZhouDepartment of Biological Sciences, University of Idaho, Moscow, Idaho, USA.
Chunping WuDepartment of Otolaryngology, Eye, Ear, Nose, and Throat Hospital of Fudan University, Shanghai, China.
Pengyu CaoDepartment of Otolaryngology, Eye, Ear, Nose, and Throat Hospital of Fudan University, Shanghai, China.
Chen XuShanghai Key Laboratory for Reproductive Medicine, Department of Histology and Embryology, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Dongsheng HouShanghai Key Laboratory for Reproductive Medicine, Department of Histology and Embryology, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Yuezhu WangShanghai-MOST Key Laboratory of Health and Disease Genomics, Chinese National Human Genome Sequencing Centre, Shanghai, China.
Liang ZhouDepartment of Otolaryngology, Eye, Ear, Nose, and Throat Hospital of Fudan University, Shanghai, China yishi750@163.com zhoulent@126.com.
Obstetrics and Gynecology Hospital of Fudan University · CNShanghai Jiao Tong University · CNChinese National Human Genome Center · CNPudong Medical Center · CNUniversity of Idaho · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The compositions and abundances of the microbiota in the ecological niche of the human throat and the possible relationship between the microbiota and laryngeal cancer are poorly understood. To obtain insight into this, we enrolled 27 laryngeal carcinoma patients and 28 subjects with vocal cord polyps as controls. For each subject, we simultaneously collected swab samples from the upper throat near the epiglottis (site I) and tissue samples from the vestibulum laryngis to the subglottic region (site II). The microbiota of the throat were fully characterized by pyrosequencing of barcoded 16S rRNA genes. We found 14 phyla, 20 classes, 38 orders, 85 families, and 218 genera in the throats of enrolled subjects. The main phyla were Firmicutes (54.7%), Fusobacteria (14.8%), Bacteroidetes (12.7%), and Proteobacteria (10.6%). Streptococcus (37.3%), Fusobacterium (11.3%), and Prevotella (10.6%) were identified as the three most predominant genera in the throat. The relative abundances of 23 bacterial genera in site I were significantly different from those in site II (P < 0.05). The relative proportions of 12 genera largely varied between laryngeal cancer patients and control subjects (P < 0.05). Collectively, this study outlined the spatial structure of microbial communities in the human throat. The spatial structure of bacterial communities significantly varied in two anatomical sites of the throat. The bacterial profiles of the throat of laryngeal cancer patients were strongly different from those of control subjects, and several of these microorganisms may be related to laryngeal carcinoma.

Indexed as

BiotaBacteriaCarcinomaCluster AnalysisDNA, BacterialDNA, RibosomalHumansLaryngeal NeoplasmsMolecular Sequence DataPharynxPhylogenyRisk FactorsRNA, Ribosomal, 16SSequence Analysis, DNADNA, BacterialDNA, RibosomalRNA, Ribosomal, 16S

Identifiers

PMID25239901
PMCPMC4249186
OpenAlexW2003729316

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.