Evidence map›Paper›PMID 25237191›Full record

ArticleThe Journal of biological chemistry2014

Oxidation of the tryptophan 32 residue of human superoxide dismutase 1 caused by its bicarbonate-dependent peroxidase activity triggers the non-amyloid aggregation of the enzyme.

Fernando R Coelho, Asif Iqbal, Edlaine Linares, Daniel F Silva, Filipe S Lima, Iolanda M Cuccovia, Ohara Augusto

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 46 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Fernando R CoelhoDepartamento de Bioquímica, Instituto de Química, Universidade de São Paulo, 05513-970 São Paulo, SP, Brazil.
Asif IqbalDepartamento de Bioquímica, Instituto de Química, Universidade de São Paulo, 05513-970 São Paulo, SP, Brazil.
Edlaine LinaresDepartamento de Bioquímica, Instituto de Química, Universidade de São Paulo, 05513-970 São Paulo, SP, Brazil.
Daniel F SilvaDepartamento de Bioquímica, Instituto de Química, Universidade de São Paulo, 05513-970 São Paulo, SP, Brazil.
Filipe S LimaDepartamento de Bioquímica, Instituto de Química, Universidade de São Paulo, 05513-970 São Paulo, SP, Brazil.
Iolanda M CuccoviaDepartamento de Bioquímica, Instituto de Química, Universidade de São Paulo, 05513-970 São Paulo, SP, Brazil.
Ohara AugustoDepartamento de Bioquímica, Instituto de Química, Universidade de São Paulo, 05513-970 São Paulo, SP, Brazil. Electronic address: oaugusto@iq.usp.br.
Universidade de São Paulo · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The role of oxidative post-translational modifications of human superoxide dismutase 1 (hSOD1) in the amyotrophic lateral sclerosis (ALS) pathology is an attractive hypothesis to explore based on several lines of evidence. Among them, the remarkable stability of hSOD1(WT) and several of its ALS-associated mutants suggests that hSOD1 oxidation may precede its conversion to the unfolded and aggregated forms found in ALS patients. The bicarbonate-dependent peroxidase activity of hSOD1 causes oxidation of its own solvent-exposed Trp(32) residue. The resulting products are apparently different from those produced in the absence of bicarbonate and are most likely specific for simian SOD1s, which contain the Trp(32) residue. The aims of this work were to examine whether the bicarbonate-dependent peroxidase activity of hSOD1 (hSOD1(WT) and hSOD1(G93A) mutant) triggers aggregation of the enzyme and to comprehend the role of the Trp(32) residue in the process. The results showed that Trp(32) residues of both enzymes are oxidized to a similar extent to hSOD1-derived tryptophanyl radicals. These radicals decayed to hSOD1-N-formylkynurenine and hSOD1-kynurenine or to a hSOD1 covalent dimer cross-linked by a ditryptophan bond, causing hSOD1 unfolding, oligomerization, and non-amyloid aggregation. The latter process was inhibited by tempol, which recombines with the hSOD1-derived tryptophanyl radical, and did not occur in the absence of bicarbonate or with enzymes that lack the Trp(32) residue (bovine SOD1 and hSOD1(W32F) mutant). The results support a role for the oxidation products of the hSOD1-Trp(32) residue, particularly the covalent dimer, in triggering the non-amyloid aggregation of hSOD1.

Indexed as

Amino Acid SequenceAmino Acid SubstitutionBicarbonatesHumansMolecular Sequence DataOxidation-ReductionProtein Aggregation, PathologicalProtein CarbonylationProtein MultimerizationSuperoxide DismutaseSuperoxide Dismutase-1TryptophanBicarbonatesSOD1 protein, humanSuperoxide DismutaseSuperoxide Dismutase-1TryptophanAmyotrophic Lateral Sclerosis (ALS) (Lou Gehrig Disease)BicarbonateBicarbonate-dependent Peroxidase ActivityDitryptophanFree RadicalsHuman SOD1Protein AggregationProtein OxidationSuperoxide Dismutase (SOD)

Identifiers

PMID25237191
PMCPMC4215247
OpenAlexW2011458759

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.