Evidence map›Paper›PMID 25237017›Full record

ArticleGenome announcements2014

Complete Genome Sequence of Flavobacterium psychrophilum Strain CSF259-93, Used To Select Rainbow Trout for Increased Genetic Resistance against Bacterial Cold Water Disease.

Gregory D Wiens, Scott E LaPatra, Timothy J Welch, Caird Rexroad, Douglas R Call, Kenneth D Cain, Benjamin R LaFrentz, Benjamin Vaisvil, Daniel P Schmitt, Vinayak Kapatral

Abstract read
In one paragraph

Article in Genome announcements, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Review
  2. Article
  3. Methylation of foreign DNA overcomes the restriction barrier ofApplied and environmental microbiology · 2025
    Article
  4. Article
  5. Dual RNA-Seq ofPathogens (Basel, Switzerland) · 2023
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Complete Genome Sequence ofGenome announcements · 2017
    Article
  12. The Emerging Fish PathogenFrontiers in microbiology · 2017
    Article
  13. Article
  14. Article
  15. Genomic Characterization ofFrontiers in microbiology · 2017
    Article
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Gregory D WiensNational Center for Cool and Cold Water Aquaculture, Agricultural Research Service, United States Department of Agriculture, Kearneysville, West Virginia, USA greg.wiens@ars.usda.gov.
Scott E LaPatraResearch Division, Clear Springs Foods, Inc., Buhl, Idaho, USA.
Timothy J WelchResearch Division, Clear Springs Foods, Inc., Buhl, Idaho, USA.
Caird RexroadNational Center for Cool and Cold Water Aquaculture, Agricultural Research Service, United States Department of Agriculture, Kearneysville, West Virginia, USA.
Douglas R CallPaul G. Allen School for Global Animal Health, Washington State University, Pullman, Washington, USA.
Kenneth D CainDepartment of Fish and Wildlife Sciences and the Aquaculture Research Institute, University of Idaho, Moscow, Idaho, USA.
Benjamin R LaFrentzAquatic Animal Health Research Unit, Agricultural Research Service, United States Department of Agriculture, Auburn, Alabama, USA.
Benjamin VaisvilIgenbio, Inc., Chicago, Illinois, USA.
Daniel P SchmittIgenbio, Inc., Chicago, Illinois, USA.
Vinayak KapatralIgenbio, Inc., Chicago, Illinois, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genome sequence of Flavobacterium psychrophilum strain CSF259-93, isolated from rainbow trout (Oncorhynchus mykiss), consists of a single circular genome of 2,900,735 bp and 2,701 predicted open reading frames (ORFs). Strain CSF259-93 has been used to select a line of rainbow trout with increased genetic resistance against bacterial cold water disease.

Identifiers

PMID25237017
PMCPMC4172266

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.