Evidence map›Paper›PMID 25232307›Full record

ArticleFrontiers in neuroanatomy2014

Long-term Cre-mediated retrograde tagging of neurons using a novel recombinant pseudorabies virus.

Hassana K Oyibo, Petr Znamenskiy, Hysell V Oviedo, Lynn W Enquist, Anthony M Zador

Open access · goldAbstract read
In one paragraph

Article in Frontiers in neuroanatomy, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Review
  3. Virus-Based Neural Circuit Tracing.Advances in neurobiology · 2024
    Review
  4. Review
  5. Article
  6. Viral Tools for Neural Circuit Tracing.Neuroscience bulletin · 2022
    Review
  7. Article
  8. Article
  9. Review
  10. Viral tools for neuroscience.Nature reviews. Neuroscience · 2020
    Review
  11. Review
  12. Article
  13. Review
  14. Review
  15. Article
  16. A Student's Guide to Neural Circuit Tracing.Frontiers in neuroscience · 2019
    Review
  17. Article
  18. Review
  19. Article
  20. Nonhuman Primate Optogenetics: Recent Advances and Future Directions.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 5 institutions in 2 countries.

Hassana K OyiboWatson School of Biological Sciences, Cold Spring Harbor Laboratory, Cold Spring Harbor NY, USA ; Friedrich Miescher Institute for Biomedical Research Basel, Switzerland.
Petr ZnamenskiyWatson School of Biological Sciences, Cold Spring Harbor Laboratory, Cold Spring Harbor NY, USA ; Biozentrum, University of Basel Basel, Switzerland.
Hysell V OviedoWatson School of Biological Sciences, Cold Spring Harbor Laboratory, Cold Spring Harbor NY, USA ; Department of Biology, City College of New York New York, NY, USA.
Lynn W EnquistMolecular Biology and Princeton Neuroscience Institute, Princeton University Princeton, NJ, USA.
Anthony M ZadorWatson School of Biological Sciences, Cold Spring Harbor Laboratory, Cold Spring Harbor NY, USA.
City College of New York · USCold Spring Harbor Laboratory · USFriedrich Miescher Institute · CHPrinceton University · USUniversity of Basel · CH

Funding

ResourceP40OD010996 · OD · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI STRICK, PETER · 2012 to 2024
$11.0M
CENTER FOR NEUROANATOMY WITH NEUROTROPIC VIRUSES: COMPARATIVE MEDICINEP40RR018604 · NCRR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI STRICK, PETER · 2004 to 2011
$6.5M
GENETIC ANALYSIS OF HERPESVIRUS TROPISM AND VIRULENCER01NS033506 · NINDS · PRINCETON UNIVERSITY · PI ENQUIST, LYNN W. · 1995 to 2016
$3.7M
High-throughput DNA sequencing method for probing the connectivity of neural circR01NS073129 · NINDS · COLD SPRING HARBOR LABORATORY · PI ZADOR, ANTHONY M · 2010 to 2014
$2.3M
NCRR NIH HHS P40 RR018604NIH HHS P40 OD010996NINDS NIH HHS R01 NS033506NINDS NIH HHS R01 NS073129
6 · The paper itself

Abstract

Brain regions contain diverse populations of neurons that project to different long-range targets. The study of these subpopulations in circuit function and behavior requires a toolkit to characterize and manipulate their activity in vivo. We have developed a novel set of reagents based on Pseudorabies Virus (PRV) for efficient and long-term genetic tagging of neurons based on their projection targets. By deleting IE180, the master transcriptional regulator in the PRV genome, we have produced a mutant virus capable of infection and transgene expression in neurons but unable to replicate in or spread from those neurons. IE180-null mutants showed no cytotoxicity, and infected neurons exhibited normal physiological function more than 45 days after infection, indicating the utility of these engineered viruses for chronic experiments. To enable rapid and convenient construction of novel IE180-null recombinants, we engineered a bacterial artificial chromosome (BAC) shuttle-vector system for moving new constructs into the PRV IE180-null genome. Using this system we generated an IE180-null recombinant virus expressing the site-specific recombinase Cre. This Cre-expressing virus (PRV-hSyn-Cre) efficiently and robustly infects neurons in vivo and activates transgene expression from Cre-dependent vectors in local and retrograde projecting populations of neurons in the mouse. We also generated an assortment of recombinant viruses expressing fluorescent proteins (mCherry, EGFP, ECFP). These viruses exhibit long-term labeling of neurons in vitro but transient labeling in vivo. Together these novel IE180-null PRV reagents expand the toolkit for targeted gene expression in the brain, facilitating functional dissection of neuronal circuits in vivo.

Indexed as

auditory corteximmediate early gene (IEG)non-toxic retrograde labelingpseudorabies virusretrograde tracingsecondary visual cortexviral tracing

Identifiers

PMID25232307
PMCPMC4153299
OpenAlexW2052778698

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.