Evidence map›Paper›PMID 25232157›Full record

ArticleJournal of clinical microbiology2014

Occurrence of Ochroconis and Verruconis species in clinical specimens from the United States.

Alejandra Giraldo, Deanna A Sutton, Kittipan Samerpitak, G Sybren de Hoog, Nathan P Wiederhold, Josep Guarro, Josepa Gené

Open access · bronzeAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 58 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 4 countries.

Alejandra GiraldoUnitat de Micologia, Facultat de Medicina i Ciències de la Salut and IISPV, Universitat Rovira i Virgili, Reus, Spain.
Deanna A SuttonFungus Testing Laboratory, University of Texas Health Science Center, San Antonio, Texas, USA.
Kittipan SamerpitakCBS-KNAW Fungal Biodiversity Centre, Utrecht, the Netherlands Department of Microbiology, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand.
G Sybren de HoogCBS-KNAW Fungal Biodiversity Centre, Utrecht, the Netherlands.
Nathan P WiederholdFungus Testing Laboratory, University of Texas Health Science Center, San Antonio, Texas, USA.
Josep GuarroUnitat de Micologia, Facultat de Medicina i Ciències de la Salut and IISPV, Universitat Rovira i Virgili, Reus, Spain.
Josepa GenéUnitat de Micologia, Facultat de Medicina i Ciències de la Salut and IISPV, Universitat Rovira i Virgili, Reus, Spain josepa.gene@urv.cat.
The University of Texas Health Science Center at San Antonio · USUniversidad Rovira i Virgili · ESInstitut d'Investigació Sanitària Pere Virgili · ESKhon Kaen University · THWesterdijk Fungal Biodiversity Institute · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ochroconis is a dematiaceous fungus able to infect immunocompetent people. Recently, the taxonomy of the genus has been reevaluated, and the most relevant species, Ochroconis gallopava, was transferred to the new genus Verruconis. Due to the important clinical implications of these fungi and based on the recent classification, it was of interest to know the spectra of Ochroconis and Verruconis species in clinical samples received in a reference laboratory in the United States. A set of 51 isolates was identified morphologically and molecularly based on sequence analyses of the nuclear ribosomal RNA (nrRNA), actin, and β-tubulin genes. Verruconis gallopava was the most common species (68.6%), followed by Ochroconis mirabilis (21.5%). One isolate of Ochroconis cordanae was found, being reported for the first time in a clinical setting. The most common anatomical site of isolation was the lower respiratory tract (58.8%), followed by superficial and deep tissues at similar frequencies (21.6 and 19.6%, respectively). Interestingly, three new species were found, which are Ochroconis olivacea and Ochroconis ramosa from clinical specimens and Ochroconis icarus of an environmental origin. The in vitro antifungal susceptibilities of eight antifungal drugs against the Ochroconis isolates revealed that terbinafine and micafungin were the most active drugs.

Indexed as

ActinsAntifungal AgentsAscomycotaDNA, FungalEnvironmental MicrobiologyHumansMicrobial Sensitivity TestsMolecular Sequence DataMycosesPrevalenceRNA, RibosomalSequence Analysis, DNATubulinUnited StatesActinsAntifungal AgentsDNA, FungalRNA, RibosomalTubulin

Identifiers

PMID25232157
PMCPMC4313285
OpenAlexW2171727519

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.