Evidence map›Paper›PMID 25232013›Full record

ArticlePlant physiology2014

Seed-specific expression of a feedback-insensitive form of CYSTATHIONINE-γ-SYNTHASE in Arabidopsis stimulates metabolic and transcriptomic responses associated with desiccation stress.

Hagai Cohen, Hadasa Israeli, Ifat Matityahu, Rachel Amir

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
8.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 74 citations in OpenAlex.

  1. Review
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  16. SuppressedPlant physiology · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Hagai CohenLaboratory of Plant Science, Migal Galilee Technology Center, Kiryat Shmona 12100, Israel (H.C., H.I., I.M., R.A.);Faculty of Biology, Technion-Israel Institute of Technology, Haifa 32000, Israel (H.C., R.A.); andTel-Hai College, Upper Galilee 11016, Israel (R.A.).
Hadasa IsraeliLaboratory of Plant Science, Migal Galilee Technology Center, Kiryat Shmona 12100, Israel (H.C., H.I., I.M., R.A.);Faculty of Biology, Technion-Israel Institute of Technology, Haifa 32000, Israel (H.C., R.A.); andTel-Hai College, Upper Galilee 11016, Israel (R.A.).
Ifat MatityahuLaboratory of Plant Science, Migal Galilee Technology Center, Kiryat Shmona 12100, Israel (H.C., H.I., I.M., R.A.);Faculty of Biology, Technion-Israel Institute of Technology, Haifa 32000, Israel (H.C., R.A.); andTel-Hai College, Upper Galilee 11016, Israel (R.A.).
Rachel AmirLaboratory of Plant Science, Migal Galilee Technology Center, Kiryat Shmona 12100, Israel (H.C., H.I., I.M., R.A.);Faculty of Biology, Technion-Israel Institute of Technology, Haifa 32000, Israel (H.C., R.A.); andTel-Hai College, Upper Galilee 11016, Israel (R.A.) rachel@migal.org.il.
Migal - Galilee Technology Center · ILTel Hai Academic College · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

With an aim to elucidate novel metabolic and transcriptional interactions associated with methionine (Met) metabolism in seeds, we have produced transgenic Arabidopsis (Arabidopsis thaliana) seeds expressing a feedback-insensitive form of CYSTATHIONINE-γ-SYNTHASE, a key enzyme of Met synthesis. Metabolic profiling of these seeds revealed that, in addition to higher levels of Met, the levels of many other amino acids were elevated. The most pronounced changes were the higher levels of stress-related amino acids (isoleucine, leucine, valine, and proline), sugars, intermediates of the tricarboxylic acid cycle, and polyamines and lower levels of polyols, cysteine, and glutathione. These changes reflect stress responses and an altered mitochondrial energy metabolism. The transgenic seeds also had higher contents of total proteins and starch but lower water contents. In accordance with the metabolic profiles, microarray analysis identified a strong induction of genes involved in defense mechanisms against osmotic and drought conditions, including those mediated by the signaling cascades of ethylene and abscisic acid. These changes imply that stronger desiccation processes occur during seed development. The expression levels of transcripts controlling the levels of Met, sugars, and tricarboxylic acid cycle metabolites were also significantly elevated. Germination assays showed that the transgenic seeds had higher germination rates under salt and osmotic stresses and in the presence of ethylene substrate and abscisic acid. However, under oxidative conditions, the transgenic seeds displayed much lower germination rates. Altogether, the data provide new insights on the factors regulating Met metabolism in Arabidopsis seeds and on the mechanisms by which elevated Met levels affect seed composition and behavior.

Indexed as

ArabidopsisArabidopsis ProteinsCarbon-Oxygen LyasesCitric Acid CycleDesiccationGas Chromatography-Mass SpectrometryGene Expression Regulation, PlantGerminationMethionineMultigene FamilyPlants, Genetically ModifiedSeedsStarchStress, PhysiologicalArabidopsis ProteinsCarbon-Oxygen LyasesMethionineO-succinylhomoserine (thiol)-lyaseStarch

Identifiers

PMID25232013
PMCPMC4226362
OpenAlexW1996994450

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.