Evidence map›Paper›PMID 25231600›Full record

ArticleThe Journal of eukaryotic microbiology

Detection of biomarkers of pathogenic Naegleria fowleri through mass spectrometry and proteomics.

Hercules Moura, Fernando Izquierdo, Adrian R Woolfitt, Glauber Wagner, Tatiana Pinto, Carmen del Aguila, John R Barr

Abstract read
In one paragraph

Article in The Journal of eukaryotic microbiology. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Review
  4. Opportunistic free-living amoebal pathogens.Pathogens and global health · 2022
    Article
  5. Differential Growth Rates andMicrobiology spectrum · 2022
    Article
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Hercules MouraDivision of Laboratory Sciences, National Center for Environmental Health, Centers for Disease Control and Prevention, M.S. F-50, 4770 Buford Hwy NE, Atlanta, Georgia, 30341, USA.
Fernando Izquierdo
Adrian R Woolfitt
Glauber Wagner
Tatiana Pinto
Carmen del Aguila
John R Barr

Funding

Intramural CDC HHS CC999999
6 · The paper itself

Abstract

Emerging methods based on mass spectrometry (MS) can be used in the rapid identification of microorganisms. Thus far, these practical and rapidly evolving methods have mainly been applied to characterize prokaryotes. We applied matrix-assisted laser-desorption-ionization-time-of-flight mass spectrometry MALDI-TOF MS in the analysis of whole cells of 18 N. fowleri isolates belonging to three genotypes. Fourteen originated from the cerebrospinal fluid or brain tissue of primary amoebic meningoencephalitis patients and four originated from water samples of hot springs, rivers, lakes or municipal water supplies. Whole Naegleria trophozoites grown in axenic cultures were washed and mixed with MALDI matrix. Mass spectra were acquired with a 4700 TOF-TOF instrument. MALDI-TOF MS yielded consistent patterns for all isolates examined. Using a combination of novel data processing methods for visual peak comparison, statistical analysis and proteomics database searching we were able to detect several biomarkers that can differentiate all species and isolates studied, along with common biomarkers for all N. fowleri isolates. Naegleria fowleri could be easily separated from other species within the genus Naegleria. A number of peaks detected were tentatively identified. MALDI-TOF MS fingerprinting is a rapid, reproducible, high-throughput alternative method for identifying Naegleria isolates. This method has potential for studying eukaryotic agents.

Indexed as

PhylogenyAdolescentAdultAmebiasisAnimalsAxenic CultureBiomarkersBrainCattleCentral Nervous System Protozoal InfectionsChildFemaleFresh WaterGenotypeHumansMaleBiomarkersProtozoan ProteinsFree-living amoebaematrix-assisted laser-desorption-ionization-time-of-flight mass spectrometryNaegleriaprotein fingerprints

Identifiers

PMID25231600
PMCPMC5743203

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.