Evidence map›Paper›PMID 25229224›Full record

ArticleRevista do Instituto de Medicina Tropical de Sao Paulo

Detection of virulence genes in environmental strains of Vibrio cholerae from estuaries in northeastern Brazil.

Francisca Gleire Rodrigues de Menezes, Soraya da Silva Neves, Oscarina Viana de Sousa, Candida Machado Vieira Maia Vila-Nova, Rodrigo Maggioni, Grace Nazareth Diogo Theophilo, Ernesto Hofer, Regine Helena Silva dos Fernandes Vieira

Abstract read
In one paragraph

Article in Revista do Instituto de Medicina Tropical de Sao Paulo. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
  3. Virulence genes and antibiotic resistance profile ofVeterinary research forum : an international quarterly journal · 2022
    Article
  4. Virulence and Antibiotic Resistance Characteristics ofFrontiers in cellular and infection microbiology · 2021
    Article
  5. Article
  6. Article
  7. Characterisation ofInternational journal of microbiology · 2020
    Article
  8. Article
  9. Limpet (Frontiers in public health · 2018
    Article
  10. Review
  11. Riverbed Sediments as Reservoirs of MultipleJournal of environmental and public health · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Francisca Gleire Rodrigues de MenezesFederal University of Ceará, Department of Fisheries Engineering, Campus Universitário do Pici, UFC, Fortaleza, Ceará, Brazil.
Soraya da Silva NevesFederal University of Ceará, Department of Fisheries Engineering, Campus Universitário do Pici, UFC, Fortaleza, Ceará, Brazil.
Oscarina Viana de SousaMarine Sciences Institute (LABOMAR), Federal University of Ceará, Fortaleza, Ceará, Brazil.
Candida Machado Vieira Maia Vila-NovaMarine Sciences Institute (LABOMAR), Federal University of Ceará, Fortaleza, Ceará, Brazil.
Rodrigo MaggioniMarine Sciences Institute (LABOMAR), Federal University of Ceará, Fortaleza, Ceará, Brazil.
Grace Nazareth Diogo TheophiloThe Oswaldo Cruz Institute (FIOCRUZ), Rio de Janeiro, RJ, Brazil.
Ernesto HoferThe Oswaldo Cruz Institute (FIOCRUZ), Rio de Janeiro, RJ, Brazil.
Regine Helena Silva dos Fernandes VieiraMarine Sciences Institute (LABOMAR), Federal University of Ceará, Fortaleza, Ceará, Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The objectives of this study were to detect the presence of Vibrio cholerae in tropical estuaries (Northeastern Brazil) and to search for virulence factors in the environmental isolates. Water and sediment samples were inoculated onto a vibrio-selective medium (TCBS), and colonies with morphological resemblance to V. cholerae were isolated. The cultures were identified phenotypically using a dichotomous key based on biochemical characteristics. The total DNA extracted was amplified by PCR to detect ompW and by multiplex PCR to detect the virulence genes ctx, tcp, zot and rfbO1. The results of the phenotypic and genotypic identification were compared. Nine strains of V. cholerae were identified phenotypically, five of which were confirmed by detection of the species-specific gene ompW. The dichotomous key was efficient at differentiating environmental strains of V. cholerae. Strains of V. cholerae were found in all four estuaries, but none possessed virulence genes.

Indexed as

Water MicrobiologyBrazilEstuariesPhenotypePolymerase Chain ReactionVibrio choleraeVirulence FactorsVirulence Factors

Identifiers

PMID25229224
PMCPMC4172115

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.