Evidence map›Paper›PMID 25229148›Full record

ArticleBiophysical journal2014

In vivo orientation of single myosin lever arms in zebrafish skeletal muscle.

Xiaojing Sun, Stephen C Ekker, Eric A Shelden, Naoko Takubo, Yihua Wang, Thomas P Burghardt

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. In vitro and in vivo single myosin step-sizes in striated muscle.Journal of muscle research and cell motility · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Xiaojing SunDepartment of Biochemistry and Molecular Biology, Mayo Clinic Rochester, Rochester, Minnesota.
Stephen C EkkerDepartment of Biochemistry and Molecular Biology, Mayo Clinic Rochester, Rochester, Minnesota.
Eric A SheldenSchool of Molecular Biosciences, Washington State University, Pullman, Washington.
Naoko TakuboDepartment of Biochemistry and Molecular Biology, Mayo Clinic Rochester, Rochester, Minnesota.
Yihua WangDepartment of Biochemistry and Molecular Biology, Mayo Clinic Rochester, Rochester, Minnesota.
Thomas P BurghardtDepartment of Biochemistry and Molecular Biology, Mayo Clinic Rochester, Rochester, Minnesota; Department of Physiology and Biomedical Engineering, Mayo Clinic Rochester, Rochester, Minnesota. Electronic address: burghardt@mayo.edu.
Mayo Clinic · USWashington State University · US

Funding

Visualizing Actomyosin Transients by Data MergingR01AR049277 · NIAMS · MAYO CLINIC ROCHESTER · PI BURGHARDT, THOMAS P · 2004 to 2013
$3.2M
In Situ Sensing of Single Myosin Function in Hypertrophy DiseaseR01HL095572 · NHLBI · MAYO CLINIC ROCHESTER · PI BURGHARDT, THOMAS P · 2010 to 2013
$1.5M
NHLBI NIH HHS R01 HL095572NHLBI NIH HHS R01HL095572NIAMS NIH HHS R01 AR049277NIAMS NIH HHS R01AR049277
6 · The paper itself

Abstract

Cardiac and skeletal myosin assembled in the muscle lattice power contraction by transducing ATP free energy into the mechanical work of moving actin. Myosin catalytic/lever-arm domains comprise the transduction/mechanical coupling machinery that move actin by lever-arm rotation. In vivo, myosin is crowded and constrained by the fiber lattice as side chains are mutated and otherwise modified under normal, diseased, or aging conditions that collectively define the native myosin environment. Single-myosin detection uniquely defines bottom-up characterization of myosin functionality. The marriage of in vivo and single-myosin detection to study zebrafish embryo models of human muscle disease is a multiscaled technology that allows one-to-one registration of a selected myosin molecular alteration with muscle filament-sarcomere-cell-fiber-tissue-organ- and organism level phenotypes. In vivo single-myosin lever-arm orientation was observed at superresolution using a photoactivatable-green-fluorescent-protein (PAGFP)-tagged myosin light chain expressed in zebrafish skeletal muscle. By simultaneous observation of multiphoton excitation fluorescence emission and second harmonic generation from myosin, we demonstrated tag specificity for the lever arm. Single-molecule detection used highly inclined parallel beam illumination and was verified by quantized photoactivation and photobleaching. Single-molecule emission patterns from relaxed muscle in vivo provided extensive superresolved dipole orientation constraints that were modeled using docking scenarios generated for the myosin (S1) and GFP crystal structures. The dipole orientation data provided sufficient constraints to estimate S1/GFP coordination. The S1/GFP coordination in vivo is rigid and the lever-arm orientation distribution is well-ordered in relaxed muscle. For comparison, single myosins in relaxed permeabilized porcine papillary muscle fibers indicated slightly differently oriented lever arms and rigid S1/GFP coordination. Lever arms in both muscles indicated one preferred spherical polar orientation and widely distributed azimuthal orientations relative to the fiber symmetry axis. Cardiac myosin is more radially displaced from the fiber axis. Probe rigidity implies the PAGFP tag reliably indicates cross-bridge orientation in situ and in vivo.

Indexed as

ZebrafishAnimalsBinding SitesCrystallography, X-RayGreen Fluorescent ProteinsHumansMolecular Docking SimulationMuscle RelaxationMuscle, SkeletalMyocardiumMyosin Light ChainsMyosinsProtein Structure, SecondaryGreen Fluorescent ProteinsMyosin Light ChainsMyosins

Identifiers

PMID25229148
PMCPMC4167300
OpenAlexW2038388357

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.