Evidence map›Paper›PMID 25229140›Full record

ArticleBiophysical journal2014

The transmembrane domain peptide of vesicular stomatitis virus promotes both intermediate and pore formation during PEG-mediated vesicle fusion.

Tanusree Sengupta, Hirak Chakraborty, Barry R Lentz

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.4field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. The Interplay of Lipids and Peptides in Membrane Merger.Advances in experimental medicine and biology · 2026
    Review
  2. Article
  3. Article
  4. Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Tanusree SenguptaDepartment of Biochemistry and Biophysics, University of North Carolina at Chapel Hill, North Carolina; Program in Molecular and Cellular Biophysics, University of North Carolina at Chapel Hill, North Carolina.
Hirak ChakrabortyDepartment of Biochemistry and Biophysics, University of North Carolina at Chapel Hill, North Carolina; Program in Molecular and Cellular Biophysics, University of North Carolina at Chapel Hill, North Carolina.
Barry R LentzDepartment of Biochemistry and Biophysics, University of North Carolina at Chapel Hill, North Carolina; Program in Molecular and Cellular Biophysics, University of North Carolina at Chapel Hill, North Carolina. Electronic address: uncbrl@med.unc.edu.
University of North Carolina at Chapel Hill · US

Funding

MICROSTRUCTURAL HETEROGENEITY IN MEMBRANESR01GM032707 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LENTZ, BARRY R · 1985 to 2010
$3.0M
NIGMS NIH HHS GM32707NIGMS NIH HHS R01 GM032707
6 · The paper itself

Abstract

We propose mechanisms by which the transmembrane domain of vesicular stomatitis virus (VSV-TMD) promotes both initiation of fusion and formation of a fusion pore. Time courses of polyethyleneglycol (PEG)-mediated fusion of 25 nm small unilamellar vesicles composed of dioleoylphosphatidylcholine, dioleoylphosphatidylethanolamine (DOPE), bovine brain sphingomyelin, and cholesterol (35:30:15:20 molar ratio) were recorded at pH 7.4 at five different temperatures (from 17°C to 37°C) and compared with time courses obtained with the same vesicles containing the fusion-active TMD of the G protein of VSV. Multiple time courses were fitted globally to a one-intermediate ensemble kinetic model to estimate the rate constants for conversion of the aggregated state to an intermediate hemifused state (k1, stalk, or I1) that rapidly transits to an unstable intermediate (I2 state) that converts to a final fusion pore state with a combined rate k3. The probabilities of lipid mixing, contents mixing, and contents leakage in the three states were also obtained from this analysis. The activation thermodynamics for each step were consistent with previously published models of lipid rearrangements during intermediate and pore formation. The influences of VSV-TMD, hexadecane, and VSV-TMD + hexadecane on the kinetics, activation thermodynamics, and membrane structure support the hypothesis that these two agents do not catalyze fusion by a common mechanism, except possibly at the lowest temperatures examined. VSV-TMD primarily catalyzed initial intermediate formation, although it substantially increased the probability of contents mixing in the intermediate state. Our results support the hypothesis that the catalytic influence of VSV-TMD on the initial-intermediate- and pore-forming steps of PEG-mediated fusion derives from its ability to impose a positive intrinsic curvature and thereby stress small unilamellar vesicle outer leaflets as well as the periphery of intermediate microstructures.

Indexed as

AlkanesAmino Acid SequenceAnimalsCattleCell MembraneLipid BilayersMolecular Sequence DataPeptidesPolyethylene GlycolsPorosityProtein Structure, TertiaryThermodynamicsVesiculovirusViral ProteinsVirus InternalizationAlkanesLipid Bilayersn-hexadecanePeptidesPolyethylene GlycolsViral Proteins

Identifiers

PMID25229140
PMCPMC4167533
OpenAlexW2013714141

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.