Evidence map›Paper›PMID 25228770›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Apoptotic pore formation is associated with in-plane insertion of Bak or Bax central helices into the mitochondrial outer membrane.

Dana Westphal, Grant Dewson, Marie Menard, Paul Frederick, Sweta Iyer, Ray Bartolo, Leonie Gibson, Peter E Czabotar, Brian J Smith, Jerry M Adams and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
7.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 122 citations in OpenAlex.

  1. Review
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  7. The Janus-faced functions of Apolipoproteins L in membrane dynamics.Cellular and molecular life sciences : CMLS · 2024
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  8. Review
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  20. Membrane-dependent amyloid aggregation of human BAX α9 (173-192).Protein science : a publication of the Protein Society · 2021
    Article

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Dana WestphalMolecular Genetics of Cancer Division, Department of Medical Biology, University of Melbourne, Parkville, VIC 3010, Australia; and.
Grant DewsonDepartment of Medical Biology, University of Melbourne, Parkville, VIC 3010, Australia; and Cell Signalling and Cell Death Division, and.
Marie MenardMolecular Genetics of Cancer Division.
Paul FrederickMolecular Genetics of Cancer Division.
Sweta IyerMolecular Genetics of Cancer Division, Department of Medical Biology, University of Melbourne, Parkville, VIC 3010, Australia; and.
Ray BartoloMolecular Genetics of Cancer Division.
Leonie GibsonMolecular Genetics of Cancer Division.
Peter E CzabotarDepartment of Medical Biology, University of Melbourne, Parkville, VIC 3010, Australia; and Structural Biology Division, The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC 3052, Australia;
Brian J SmithSchool of Molecular Sciences, La Trobe Institute for Molecular Sciences, La Trobe University, Melbourne, VIC 3086, Australia.
Jerry M AdamsMolecular Genetics of Cancer Division, Department of Medical Biology, University of Melbourne, Parkville, VIC 3010, Australia; and adams@wehi.edu.au kluck@wehi.edu.au.
Ruth M KluckMolecular Genetics of Cancer Division, Department of Medical Biology, University of Melbourne, Parkville, VIC 3010, Australia; and adams@wehi.edu.au kluck@wehi.edu.au.
Cancer Genetics (United States) · USUniversity of Melbourne · AULa Trobe University · AUWalter and Eliza Hall Institute of Medical Research · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The pivotal step on the mitochondrial pathway to apoptosis is permeabilization of the mitochondrial outer membrane (MOM) by oligomers of the B-cell lymphoma-2 (Bcl-2) family members Bak or Bax. However, how they disrupt MOM integrity is unknown. A longstanding model is that activated Bak and Bax insert two α-helices, α5 and α6, as a hairpin across the MOM, but recent insights on the oligomer structures question this model. We have clarified how these helices contribute to MOM perforation by determining that, in the oligomers, Bak α5 (like Bax α5) remains part of the protein core and that a membrane-impermeable cysteine reagent can label cysteines placed at many positions in α5 and α6 of both Bak and Bax. The results are inconsistent with the hairpin insertion model but support an in-plane model in which α5 and α6 collapse onto the membrane and insert shallowly to drive formation of proteolipidic pores.

Indexed as

Amino Acid SequenceAmino Acid SubstitutionAnimalsApoptosisbcl-2-Associated X Proteinbcl-2 Homologous Antagonist-Killer ProteinCell LineCysteineHumansMiceMitochondrial MembranesModels, MolecularMolecular Sequence DataMutagenesis, Site-DirectedProtein Structure, QuaternaryProtein Structure, Secondary4-acetamido-4'-((iodoacetyl)amino)stilbene-2,2'-disulfonateBAK1 protein, humanBAX protein, humanbcl-2-Associated X Proteinbcl-2 Homologous Antagonist-Killer ProteinCysteineRecombinant ProteinsStilbenesSulfhydryl Reagentscell deathcysteine-scanning mutagenesismembrane poresmitochondrial permeabilizationprotein-membrane topology

Identifiers

PMID25228770
PMCPMC4191798
OpenAlexW2038157729

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.