Evidence map›Paper›PMID 25226023›Full record

ArticleJournal of visualized experiments : JoVE2014

Preparation of synaptic plasma membrane and postsynaptic density proteins using a discontinuous sucrose gradient.

Marie Kristel Bermejo, Marija Milenkovic, Ali Salahpour, Amy J Ramsey

Abstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed.

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  12. Regulation of Sleep Amount by CRTC1 via Transcription ofThe Journal of neuroscience : the official journal of the Society for Neuroscience · 2025
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  20. MicroglialThe Journal of neuroscience : the official journal of the Society for Neuroscience · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Marie Kristel BermejoDepartment of Pharmacology and Toxicology, University of Toronto.
Marija MilenkovicDepartment of Pharmacology and Toxicology, University of Toronto.
Ali SalahpourDepartment of Pharmacology and Toxicology, University of Toronto.
Amy J RamseyDepartment of Pharmacology and Toxicology, University of Toronto; a.ramsey@utoronto.ca.

Funding

Canadian Institutes of Health Research
6 · The paper itself

Abstract

Neuronal subcellular fractionation techniques allow the quantification of proteins that are trafficked to and from the synapse. As originally described in the late 1960's, proteins associated with the synaptic plasma membrane can be isolated by ultracentrifugation on a sucrose density gradient. Once synaptic membranes are isolated, the macromolecular complex known as the post-synaptic density can be subsequently isolated due to its detergent insolubility. The techniques used to isolate synaptic plasma membranes and post-synaptic density proteins remain essentially the same after 40 years, and are widely used in current neuroscience research. This article details the fractionation of proteins associated with the synaptic plasma membrane and post-synaptic density using a discontinuous sucrose gradient. Resulting protein preparations are suitable for western blotting or 2D DIGE analysis.

Indexed as

AnimalsCentrifugation, Density GradientMembrane ProteinsMiceNerve Tissue ProteinsSucroseSynaptic MembranesSynaptosomesMembrane ProteinsNerve Tissue Proteinspostsynaptic density proteinsSucrose

Identifiers

PMID25226023
PMCPMC4828025

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.