Evidence map›Paper›PMID 25225870›Full record

ArticlePloS one2014

A cell-based high-throughput screen for novel chemical inducers of fetal hemoglobin for treatment of hemoglobinopathies.

Kenneth R Peterson, Flávia C Costa, Halyna Fedosyuk, Renee Y Neades, Allen M Chazelle, Lesya Zelenchuk, Andrea H Fonteles, Parmita Dalal, Anuradha Roy, Rathnam Chaguturu and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Discovery of small molecule inhibitors of Plasmodium falciparum apicoplast DNA polymerase.Journal of enzyme inhibition and medicinal chemistry · 2022
    Article
  3. Article
  4. Review
  5. Mouse Models of Erythropoiesis and Associated Diseases.Methods in molecular biology (Clifton, N.J.) · 2018
    Review
  6. Kinetic assay shows that increasing red cell volume could be a treatment for sickle cell disease.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Kenneth R PetersonDepartment of Biochemistry and Molecular Biology, University of Kansas Medical Center, Kansas City, Kansas, United States of America; Department of Anatomy and Cell Biology, University of Kansas Medical Center, Kansas City, Kansas, United States of America.
Flávia C CostaDepartment of Biochemistry and Molecular Biology, University of Kansas Medical Center, Kansas City, Kansas, United States of America.
Halyna FedosyukDepartment of Biochemistry and Molecular Biology, University of Kansas Medical Center, Kansas City, Kansas, United States of America.
Renee Y NeadesDepartment of Biochemistry and Molecular Biology, University of Kansas Medical Center, Kansas City, Kansas, United States of America.
Allen M ChazelleDepartment of Biochemistry and Molecular Biology, University of Kansas Medical Center, Kansas City, Kansas, United States of America.
Lesya ZelenchukDepartment of Biochemistry and Molecular Biology, University of Kansas Medical Center, Kansas City, Kansas, United States of America.
Andrea H FontelesDepartment of Biochemistry and Molecular Biology, University of Kansas Medical Center, Kansas City, Kansas, United States of America.
Parmita DalalDepartment of Biochemistry and Molecular Biology, University of Kansas Medical Center, Kansas City, Kansas, United States of America.
Anuradha RoyHigh Throughput Screening Laboratory, University of Kansas, Lawrence, Kansas, United States of America.
Rathnam ChaguturuHigh Throughput Screening Laboratory, University of Kansas, Lawrence, Kansas, United States of America.
Biaoru LiDepartment of Pediatrics, Georgia Regents University, Augusta, Georgia, United States of America.
Betty S PaceDepartment of Pediatrics, Georgia Regents University, Augusta, Georgia, United States of America; Department of Molecular and Cell Biology, Georgia Regents University, Augusta, Georgia, United States of America.
University of Kansas Medical Center · USGeorgia Regents Medical Center · USUniversity of Kansas · US

Funding

Transgenic & Gene-Targeting Shared ResourceP30CA168524 · NCI · UNIVERSITY OF KANSAS MEDICAL CENTER · PI NICOLE L NOLLEN · 2012 to 2026
$40.1M
WEIGHT CONTROL, CELL SIGNALING AND CANCER PREVENTIONP20RR015563 · NCRR · UNIVERSITY OF KANSAS LAWRENCE · PI ZUFFEREY, RACHEL · 2000 to 2009
$20.1M
Novel Approaches for the Control of Microbial PathogensP30GM103326 · NIGMS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI LUTKENHAUS, JOSEPH F · 2012 to 2016
$5.3M
Mechanisms For p38 MAP Kinase DependentT Gene InductionR01HL069234 · NHLBI · UNIVERSITY OF TEXAS DALLAS · PI PACE, BETTY SUE · 2001 to 2017
$4.6M
Center for Cancer Experimental TherapeuticsP30GM103495 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI TIMMERMANN, BARBARA N · 2012 to 2014
$3.2M
Regulation of Globin Gene Switching in Human ES CellsR01HL067336 · NHLBI · UNIVERSITY OF KANSAS MEDICAL CENTER · PI PETERSON, KENNETH R · 2001 to 2004
$1.5M
Mechanisms of HbF Activation by Non-deletional HPFHR01HL111264 · NHLBI · UNIVERSITY OF KANSAS MEDICAL CENTER · PI PETERSON, KENNETH R · 2013 to 2016
$1.5M
Transactivation of Fetal HemoglobinR01DK081290 · NIDDK · UNIVERSITY OF KANSAS MEDICAL CENTER · PI PETERSON, KENNETH R · 2008 to 2011
$1.4M
Molecular control of fetal G-globin gene expressionR01DK061804 · NIDDK · UNIVERSITY OF KANSAS MEDICAL CENTER · PI PETERSON, KENNETH R · 2001 to 2004
$1.2M
Locus-linked Regulatory Motifs of Globin Gene SwitchingR56HL067336 · NHLBI · UNIVERSITY OF KANSAS MEDICAL CENTER · PI PETERSON, KENNETH R · 2008 to 2008
$368k
Transactivation of Fetal HemoglobinR56DK081290 · NIDDK · UNIVERSITY OF KANSAS MEDICAL CENTER · PI PETERSON, KENNETH R · 2007 to 2007
$110k
NCI NIH HHS 5 P30 CA168524NCI NIH HHS P30 CA168524NCRR NIH HHS P20 RR015563NHLBI NIH HHS HL067336NHLBI NIH HHS HL069234NHLBI NIH HHS R01 HL067336NHLBI NIH HHS R01 HL069234NHLBI NIH HHS R01 HL111264NHLBI NIH HHS R56 HL067336NIDDK NIH HHS DK061804NIDDK NIH HHS DK081290NIDDK NIH HHS R01 DK061804NIDDK NIH HHS R01 DK081290NIDDK NIH HHS R56 DK081290NIGMS NIH HHS 8 P30 GM103495NIGMS NIH HHS P30 GM103326NIGMS NIH HHS P30 GM103495
6 · The paper itself

Abstract

Decades of research have established that the most effective treatment for sickle cell disease (SCD) is increased fetal hemoglobin (HbF). Identification of a drug specific for inducing γ-globin expression in pediatric and adult patients, with minimal off-target effects, continues to be an elusive goal. One hurdle has been an assay amenable to a high-throughput screen (HTS) of chemicals that displays a robust γ-globin off-on switch to identify potential lead compounds. Assay systems developed in our labs to understand the mechanisms underlying the γ- to β-globin gene expression switch during development has allowed us to generate a cell-based assay that was adapted for a HTS of 121,035 compounds. Using chemical inducer of dimerization (CID)-dependent bone marrow cells (BMCs) derived from human γ-globin promoter-firefly luciferase β-globin promoter-Renilla luciferase β-globin yeast artificial chromosome (γ-luc β-luc β-YAC) transgenic mice, we were able to identify 232 lead chemical compounds that induced γ-globin 2-fold or higher, with minimal or no β-globin induction, minimal cytotoxicity and that did not directly influence the luciferase enzyme. Secondary assays in CID-dependent wild-type β-YAC BMCs and human primary erythroid progenitor cells confirmed the induction profiles of seven of the 232 hits that were cherry-picked for further analysis.

Indexed as

Drug DiscoveryHigh-Throughput Screening AssaysAnimalsAntigens, CD34beta-GlobinsBone Marrow CellsChromosomes, Artificial, YeastDrug Evaluation, PreclinicalErythroid Precursor CellsFetal Hemoglobingamma-GlobinsGene Expression RegulationGenes, ReporterGene TargetingGenetic LociGenetic VectorsAntigens, CD34beta-GlobinsFetal Hemoglobingamma-Globins

Identifiers

PMID25225870
PMCPMC4165891
OpenAlexW2134581728

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.