Evidence map›Paper›PMID 25224588›Full record

ArticleNature communications2014

A sequence variant in human KALRN impairs protein function and coincides with reduced cortical thickness.

Theron A Russell, Katherine D Blizinsky, Derin J Cobia, Michael E Cahill, Zhong Xie, Robert A Sweet, Jubao Duan, Pablo V Gejman, Lei Wang, John G Csernansky and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Nature communications, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.5field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 38 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Theron A RussellDepartment of Physiology, Northwestern University Feinberg School of Medicine, Chicago, Illinois 60611, USA.
Katherine D Blizinsky1] Department of Physiology, Northwestern University Feinberg School of Medicine, Chicago, Illinois 60611, USA [2] Department of Psychiatry and Behavioral Sciences, Northwestern University Feinberg School of Medicine, Chicago, Illinois 60611, USA.
Derin J CobiaDepartment of Psychiatry and Behavioral Sciences, Northwestern University Feinberg School of Medicine, Chicago, Illinois 60611, USA.
Michael E CahillDepartment of Physiology, Northwestern University Feinberg School of Medicine, Chicago, Illinois 60611, USA.
Zhong XieDepartment of Physiology, Northwestern University Feinberg School of Medicine, Chicago, Illinois 60611, USA.
Robert A Sweet1] Department of Psychiatry, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15213, USA [2] Department of Neurology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15213, USA.
Jubao Duan1] Department of Psychiatry and Behavioral Sciences, University of Chicago, Chicago, Illinois 60637, USA [2] Department of Psychiatry and Behavioral Sciences, NorthShore University HealthSystem, Evanston, Illinois 60208, USA.
Pablo V Gejman1] Department of Psychiatry and Behavioral Sciences, University of Chicago, Chicago, Illinois 60637, USA [2] Department of Psychiatry and Behavioral Sciences, NorthShore University HealthSystem, Evanston, Illinois 60208, USA.
Lei Wang1] Department of Psychiatry and Behavioral Sciences, Northwestern University Feinberg School of Medicine, Chicago, Illinois 60611, USA [2] Department of Radiology, Northwestern University Feinberg School of Medicine, Chicago, Illinois 60611, USA.
John G CsernanskyDepartment of Psychiatry and Behavioral Sciences, Northwestern University Feinberg School of Medicine, Chicago, Illinois 60611, USA.
Peter Penzes1] Department of Physiology, Northwestern University Feinberg School of Medicine, Chicago, Illinois 60611, USA [2] Department of Psychiatry and Behavioral Sciences, Northwestern University Feinberg School of Medicine, Chicago, Illinois 60611, USA.
Northwestern University · USUniversity of Chicago · USUniversity of Pittsburgh · US

Funding

STRUCTURE, FUNCTION AND COGNITION IN SCHIZOPHRENIAP50MH071616 · NIMH · WASHINGTON UNIVERSITY · PI BARCH, DEANNA · 2004 to 2008
$11.2M
Small GTPase signaling in spinesR01MH071316 · NIMH · NORTHWESTERN UNIVERSITY AT CHICAGO · PI BARBOLINA, MARIA V., PENZES, PETER · 2005 to 2025
$7.1M
Plasticity of Auditory Cortical Circuits in SchizophreniaR01MH071533 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SWEET, ROBERT A · 2004 to 2018
$6.9M
Synaptic and dendritic dysfunction in psychiatric disordersR01MH097216 · NIMH · NORTHWESTERN UNIVERSITY AT CHICAGO · PI PENZES, PETER · 2012 to 2021
$6.1M
NEUROMORPHOMETRY IN SCHIZOPHRENIA BY COMPUTER ALGORITHMR01MH056584 · NIMH · WASHINGTON UNIVERSITY · PI CSERNANSKY, JOHN G · 1998 to 2011
$4.2M
Schizophrenia Data and Software Tool Federation using BIRN InfrastructureR01MH084803 · NIMH · NORTHWESTERN UNIVERSITY AT CHICAGO · PI WANG, LEI · 2009 to 2011
$933k
Small GTPase signaling in dendrites and spinesR56MH071316 · NIMH · NORTHWESTERN UNIVERSITY AT CHICAGO · PI PENZES, PETER · 2020 to 2020
$782k
Genetic Perturbation of a Schizophrenia Susceptibility Locus in Isogenic Human NeR21MH102685 · NIMH · ENDEAVOR HEALTH CLINICAL OPERATIONS · PI DUAN, JUBAO · 2014 to 2015
$429k
NIMH NIH HHS MH071316NIMH NIH HHS MH071616NIMH NIH HHS MH084803NIMH NIH HHS MH097216NIMH NIH HHS P50 MH071616NIMH NIH HHS R01 MH056584NIMH NIH HHS R01 MH071316NIMH NIH HHS R01 MH071533NIMH NIH HHS R01 MH084803NIMH NIH HHS R01 MH097216NIMH NIH HHS R21 MH102685NIMH NIH HHS R56 MH071316
6 · The paper itself

Abstract

Dendritic spine pathology is a key feature of several neuropsychiatric disorders. The Rac1 guanine nucleotide exchange factor kalirin-7 is critical for spine morphogenesis on cortical pyramidal neurons. Here we identify a rare coding variant in the KALRN gene region that encodes the catalytic domain, in a schizophrenia patient and his sibling with major depressive disorder. The D1338N substitution significantly diminished the protein's ability to catalyse the activation of Rac1. Contrary to wild-type kalirin-7, kalirin-7-D1338N failed to increase spine size and density. Both subjects carrying the polymorphism displayed reduced cortical volume in the superior temporal sulcus (STS), a region implicated in schizophrenia. Consistent with this, mice with reduced kalirin expression showed reduced neuropil volume in the rodent homologue of the STS. These data suggest that single amino acid changes in proteins involved in dendritic spine function can have significant effects on the structure and function of the cerebral cortex.

Indexed as

Amino Acid SubstitutionAdultAnimalsCase-Control StudiesCerebral CortexEmbryo, MammalianFemaleGene Expression RegulationGuanine Nucleotide Exchange FactorsHumansMagnetic Resonance ImagingMajor Depressive DisorderMaleMiceMice, TransgenicNeuronsGuanine Nucleotide Exchange FactorsKALRN protein, humanProtein Serine-Threonine Kinasesrac1 GTP-Binding ProteinRAC1 protein, human

Identifiers

PMID25224588
PMCPMC4166532
OpenAlexW2036605837

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.