Evidence map›Paper›PMID 25224454›Full record

ArticleHuman molecular genetics2015

Genome-wide admixture and association study of serum iron, ferritin, transferrin saturation and total iron binding capacity in African Americans.

Jin Li, Leslie A Lange, Qing Duan, Yurong Lu, Andrew B Singleton, Alan B Zonderman, Michele K Evans, Yun Li, Herman A Taylor, Monte S Willis and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Human molecular genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
1.5field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 23 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Ethnic Differences in Iron Status.Advances in nutrition (Bethesda, Md.) · 2021
    Review
  7. Article
  8. Article
  9. Ethnic and genetic factors of iron status in women of reproductive age.The American journal of clinical nutrition · 2017
    Observational
  10. Article
  11. Article
  12. Observational
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Jin LiDepartment of Genetics.
Leslie A LangeDepartment of Genetics.
Qing DuanDepartment of Genetics.
Yurong LuDepartment of Genetics.
Andrew B SingletonLaboratory of Neurogenetics.
Alan B ZondermanLaboratory of Personality and Cognition and.
Michele K EvansHealth Disparities Unit, National Institute on Aging, National Institutes of Health, Bethesda, MD 21225, USA.
Yun LiDepartment of Genetics Department of Biostatistics and.
Herman A TaylorDepartment of Medicine and School of Health Sciences, Jackson State University, Jackson, MS 39217, USA and Division of Natural Science, Tougaloo College, Tougaloo, MS 39174, USA.
Monte S WillisDepartment of Pathology and Laboratory Medicine, University of North Carolina, Chapel Hill, NC 27599, USA.
Mike NallsLaboratory of Neurogenetics.
James G WilsonDepartment of Physiology and Biophysics, University of Mississippi Medical Center, Jackson, MS 39216, USA.
Ethan M LangeDepartment of Genetics Department of Biostatistics and elange@med.unc.edu.
Jackson State University · USNational Institutes of Health · USUniversity of Mississippi Medical Center · USUniversity of North Carolina at Chapel Hill · US

Funding

Healthy Aging In Neighborhoods of Diversity Across the Life Span (HANDLS)ZIAAG000513 · NIA · NATIONAL INSTITUTE ON AGING · PI EVANS, MICHELE K · 2009 to 2025
$70.9M
Healthy Aging Neighborhoods of Diversity Across LifespanZ01AG000513 · NIA · NATIONAL INSTITUTE ON AGING · PI EVANS, MICHELE K · 2001 to 2008
$6.8M
Imputation and Analysis of Rare Variants in Admixed PopulationsR01HG006703 · NHGRI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LI, YUN · 2012 to 2014
$931k
Intramural NIH HHSNHGRI NIH HHS R01HG006703NHLBI NIH HHS HHSN268201300046CNHLBI NIH HHS HHSN268201300047CNHLBI NIH HHS HHSN268201300048CNHLBI NIH HHS HHSN268201300049CNHLBI NIH HHS HHSN268201300050CNIA NIH HHS Z01-AG000513PHS HHS 2009-149
6 · The paper itself

Abstract

Iron is an essential component of many important proteins and enzymes, including hemoglobin, which is responsible for carrying oxygen to the cells. African Americans (AAs) have a greater prevalence of iron deficiency compared with European Americans. We conducted genome-wide admixture-mapping and association studies for serum iron, serum ferritin, transferrin saturation (SAT) and total iron binding capacity (TIBC) in 2347 AAs participating in the Jackson Heart Study (JHS). Follow-up replication analyses for JHS iron-trait associated SNPs were conducted in 329 AA participants in the Healthy Aging in Neighborhoods of Diversity across the Life Span study (HANDLS). Higher estimated proportions of global African ancestry were significantly associated with lower levels of iron (P = 2.4 × 10(-5)), SAT (P = 0.0019) and TIBC (P = 0.042). We observed significant associations (P < 5 × 10(-8)) between serum TIBC levels and two independent SNPs around TF on chromosome 3, the first report of a genome-wide significant second independent signal in this region, and SNPs near two novel genes: HDGFL1 on chromosome 6 and MAF on chromosome 16. We also observed significant associations between ferritin levels and SNPs near GAB3 on chromosome X. We replicated our two independent associations at TF and our association at GAB3 in HANDLS. Our study provides evidence for both shared and unique genetic risk factors that are associated with iron-related measures in AAs. The top two variants in TF explain 11.2% of the total variation in TIBC levels in AAs after accounting for age, gender, body mass index and background ancestry.

Indexed as

Genome-Wide Association StudyAdultAgedAnemia, Iron-DeficiencyBlack or African AmericanCohort StudiesFemaleFerritinsHumansIronMaleMiddle AgedPolymorphism, Single NucleotideTransferrinFerritinsIronTransferrin

Identifiers

PMID25224454
PMCPMC4334839
OpenAlexW2115615699

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.