Evidence map›Paper›PMID 25222495›Full record

ArticlePloS one2014

The application of new molecular methods in the investigation of a waterborne outbreak of norovirus in Denmark, 2012.

Lieke B van Alphen, Frédérique Dorléans, Anna Charlotte Schultz, Jannik Fonager, Steen Ethelberg, Camilla Dalgaard, Marianne Adelhardt, Jørgen H Engberg, Thea Kølsen Fischer, Sofie Gillesberg Lassen

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Molecular epidemiology of human adenovirus infections in Denmark, 2011-2016.Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology · 2018
    Article
  3. Monitoring human enteric viruses in wastewater and relevance to infections encountered in the clinical setting: a one-year experiment in central France, 2014 to 2015.Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2018
    Article
  4. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Lieke B van AlphenDepartment of Microbiological Diagnostics and Virology, Statens Serum Institut, Copenhagen, Denmark; European Programme of Public Health Microbiology (EUPHEM), European Centre for Disease Prevention and Control (ECDC), Stockholm, Sweden.
Frédérique DorléansDepartment of Infectious Disease Epidemiology, Statens Serum Institut, Copenhagen, Denmark; European Programme for Intervention Epidemiology Training (EPIET), European Centre for Disease Prevention and Control (ECDC), Stockholm, Sweden.
Anna Charlotte SchultzNational Food Institute, Division of Food Microbiology, Danish Technical University (DTU), Lyngby, Denmark.
Jannik FonagerDepartment of Microbiological Diagnostics and Virology, Statens Serum Institut, Copenhagen, Denmark.
Steen EthelbergDepartment of Infectious Disease Epidemiology, Statens Serum Institut, Copenhagen, Denmark.
Camilla DalgaardDepartment of Microbiological Diagnostics and Virology, Statens Serum Institut, Copenhagen, Denmark.
Marianne AdelhardtDanish Health and Medicines Authority, Public Health Medical Officers East, Denmark.
Jørgen H EngbergRegional Clinical Microbiology Laboratory, Region Zealand, Denmark.
Thea Kølsen FischerDepartment of Microbiological Diagnostics and Virology, Statens Serum Institut, Copenhagen, Denmark.
Sofie Gillesberg LassenDepartment of Infectious Disease Epidemiology, Statens Serum Institut, Copenhagen, Denmark.
Statens Serum Institut · DKEuropean Centre for Disease Prevention and Control · SENational Board of Health · DKRegion Zealand · DKTechnical University of Denmark · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In December 2012, an outbreak of acute gastrointestinal illness occurred in a geographical distinct area in Denmark covering 368 households. A combined microbiological, epidemiological and environmental investigation was initiated to understand the outbreak magnitude, pathogen(s) and vehicle in order to control the outbreak. Norovirus GII.4 New Orleans 2009 variant was detected in 15 of 17 individual stool samples from 14 households. Norovirus genomic material from water samples was detected and quantified and sequencing of longer parts of the viral capsid region (>1000 nt) were applied to patient and water samples. All five purposely selected water samples tested positive for norovirus GII in levels up to 1.8×10(4) genomic units per 200 ml. Identical norovirus sequences were found in all 5 sequenced stool samples and 1 sequenced water sample, a second sequenced water sample showed 1 nt (<0.1%) difference. In a cohort study, including 256 participants, cases were defined as residents of the area experiencing diarrhoea or vomiting onset on 12-14 December 2012. We found an attack rate of 51%. Being a case was associated with drinking tap-water on 12-13 December (relative risk = 6.0, 95%CI: 1.6-22) and a dose-response relation for the mean glasses of tap-water consumed was observed. Environmental investigations suggested contamination from a sewage pipe to the drinking water due to fall in pressure during water supply system renovations. The combined microbiological, epidemiological and environmental investigations strongly indicates the outbreak was caused by norovirus contamination of the water supply system.

Indexed as

Caliciviridae InfectionsCapsid ProteinsCohort StudiesDenmarkDisease OutbreaksDrinking WaterEnvironmental MonitoringGenome, ViralNorovirusPhylogenyWater PurificationWater SupplyCapsid ProteinsDrinking Water

Identifiers

PMID25222495
PMCPMC4164364
OpenAlexW2171201300

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.