Evidence map›Paper›PMID 25220904›Full record

ArticleDevelopmental dynamics : an official publication of the American Association of Anatomists2014

Dynamic miRNA expression patterns during retinal regeneration in zebrafish: reduced dicer or miRNA expression suppresses proliferation of Müller glia-derived neuronal progenitor cells.

Kamya Rajaram, Rachel L Harding, Travis Bailey, James G Patton, David R Hyde

Open access · bronzeAbstract read
In one paragraph

Article in Developmental dynamics : an official publication of the American Association of Anatomists, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Retina regeneration: lessons from vertebrates.Oxford open neuroscience · 2022
    Review
  6. Article
  7. Review
  8. Review
  9. Article
  10. Müller Glia-Mediated Retinal Regeneration.Molecular neurobiology · 2021
    Review
  11. Review
  12. Article
  13. Role of microRNA-25 in high glucose cultured Müller glia.International journal of ophthalmology · 2021
    Article
  14. miRNAs and Müller Glia Reprogramming During Retina Regeneration.Frontiers in cell and developmental biology · 2020
    Review
  15. Article
  16. Article
  17. Review
  18. Epigenetic Regulation of Organ Regeneration in Zebrafish.Journal of cardiovascular development and disease · 2018
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Kamya RajaramDepartment of Biological Sciences, Vanderbilt University, Nashville, Tennessee.
Rachel L Harding
Travis Bailey
James G Patton
David R Hyde
University of Notre Dame · USVanderbilt University · US

Funding

Genetic Hierarchy Underlying Photoreceptor RegenerationR01EY018417 · NEI · UNIVERSITY OF NOTRE DAME · PI HYDE, DAVID R, THUMMEL, RYAN · 2009 to 2012
$1.3M
Analysis of miRNA Function During Eye Development and Retinal RegenerationR21EY019759 · NEI · VANDERBILT UNIVERSITY · PI PATTON, JAMES G. · 2010 to 2011
$414k
NEI NIH HHS R01 EY018417NEI NIH HHS R01-EY018417NEI NIH HHS R21 EY 019759NEI NIH HHS R21 EY019759
6 · The paper itself

Abstract

backgroundAdult zebrafish spontaneously regenerate their retinas after damage. Although a number of genes and signaling pathways involved in regeneration have been identified, the exact mechanisms regulating various aspects of regeneration are unclear. microRNAs (miRNAs) were examined for their potential roles in regulating zebrafish retinal regeneration.

resultsTo investigate the requirement of miRNAs during zebrafish retinal regeneration, we knocked down the expression of Dicer in retinas prior to light-induced damage. Reduced Dicer expression significantly decreased the number of proliferating Müller glia-derived neuronal progenitor cells during regeneration. To identify individual miRNAs with roles in neuronal progenitor cell proliferation, we collected retinas at different stages of light damage and performed small RNA high-throughput sequencing. We identified subsets of miRNAs that were differentially expressed during active regeneration but returned to basal levels once regeneration was completed. We then knocked down five different miRNAs that increased in expression and assessed the effects on retinal regeneration. Reduction of miR-142b and miR-146a expression significantly reduced INL proliferation at 51 h of light treatment, while knockdown of miR-7a, miR-27c, and miR-31 expression significantly reduced INL proliferation at 72 h of constant light.

conclusionsmiRNAs exhibit dynamic expression profiles during retinal regeneration and are necessary for neuronal progenitor cell proliferation.

Indexed as

Gene Expression RegulationAnimalsCell ProliferationGene Knockdown TechniquesMicroRNAsNeural Stem CellsNeurogliaRegenerationRetinaRibonuclease IIIZebrafishZebrafish ProteinsMicroRNAsRibonuclease IIIZebrafish ProteinsDicermiRNAsretinal regenerationzebrafish

Identifiers

PMID25220904
PMCPMC4237695
OpenAlexW1541241470

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.