Evidence map›Paper›PMID 25220501›Full record

ArticleScientific reports2014

Developing conversed microsatellite markers and their implications in evolutionary analysis of the Bemisia tabaci complex.

Hua-Ling Wang, Jiao Yang, Laura M Boykin, Qiong-Yi Zhao, Yu-Jun Wang, Shu-Sheng Liu, Xiao-Wei Wang

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
7.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
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  4. Genome-Wide Identification of Auxin-ResponsiveInternational journal of molecular sciences · 2022
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  11. Review
  12. Transcriptome analysis and development of simple sequence repeat (SSR) markers inPhysiology and molecular biology of plants : an international journal of functional plant biology · 2018
    Article
  13. Article
  14. Article
  15. Genome microsatellite diversity within the Apicomplexa phylum.Molecular genetics and genomics : MGG · 2016
    Article
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Hua-Ling WangMinistry of Agriculture Key Laboratory of Agricultural Entomology, Institute of Insect Sciences, Zhejiang University, Hangzhou 310058, China.
Jiao YangMinistry of Agriculture Key Laboratory of Agricultural Entomology, Institute of Insect Sciences, Zhejiang University, Hangzhou 310058, China.
Laura M BoykinARC Centre of Excellence, Plant Energy Biology, The University of Western Australia, 35 Stirling Highway, Crawley 6009 Western Australia.
Qiong-Yi ZhaoQueensland Brain Institute, University of Queensland, Brisbane, Qld 4072, Australia.
Yu-Jun WangMinistry of Agriculture Key Laboratory of Agricultural Entomology, Institute of Insect Sciences, Zhejiang University, Hangzhou 310058, China.
Shu-Sheng LiuMinistry of Agriculture Key Laboratory of Agricultural Entomology, Institute of Insect Sciences, Zhejiang University, Hangzhou 310058, China.
Xiao-Wei WangMinistry of Agriculture Key Laboratory of Agricultural Entomology, Institute of Insect Sciences, Zhejiang University, Hangzhou 310058, China.
Zhejiang University · CNUniversity of Queensland · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The study of population genetics among the Bemisia tabaci complex is limited due to the lack of conserved molecular markers. In this study, 358, 433 and 322 new polynucleotide microsatellites are separately identified from the transcriptome sequences of three cryptic species of the B. tabaci complex. The cross species transferability of 57 microsatellites was then experimentally validated. The results indicate that these markers are conserved and have high inter-taxon transferability. Thirteen markers were employed to assess the genetic relationships among six cryptic species of the B. tabaci complex. To our surprise, the inferred phylogeny was consistent with that of mitochondrial COI sequences, indicating that microsatellites have the potential to distinguish species of the B. tabaci complex. Our results demonstrate that development of microsatellites from transcriptome data is a fast and cost-effective approach. These markers can be used to analyze the population genetics and evolutionary patterns of the B. tabaci complex.

Indexed as

Biological EvolutionGenetics, PopulationAmino Acid SequenceAnimalsHemipteraMicrosatellite RepeatsMolecular Sequence DataPhylogenyReal-Time Polymerase Chain ReactionReverse Transcriptase Polymerase Chain ReactionRNA, MessengerSequence Homology, Amino AcidRNA, Messenger

Identifiers

PMID25220501
PMCPMC4163675
OpenAlexW2042389396

What OpenQuestion holds

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LicenceCC BY-NC-SA
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.