Evidence map›Paper›PMID 25220460›Full record

ArticleCell reports2014

The RNA helicase DHX34 activates NMD by promoting a transition from the surveillance to the decay-inducing complex.

Nele Hug, Javier F Cáceres

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 78 citations in OpenAlex.

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  18. Alternative splicing redefines landscape of commonly mutated genes in acute myeloid leukemia.Proceedings of the National Academy of Sciences of the United States of America · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Nele HugMRC Human Genetics Unit, Institute of Genetics and Molecular Medicine, University of Edinburgh, Western General Hospital, Edinburgh EH4 2XU, UK.
Javier F CáceresMRC Human Genetics Unit, Institute of Genetics and Molecular Medicine, University of Edinburgh, Western General Hospital, Edinburgh EH4 2XU, UK. Electronic address: javier.caceres@igmm.ed.ac.uk.
MRC Institute of Genetics and Molecular Medicine · GBWestern General Hospital · GB

Funding

Medical Research Council MC_PC_U127584479Wellcome Trust 095518Wellcome Trust 095518/Z/11/Z
6 · The paper itself

Abstract

Nonsense-mediated decay (NMD) is a surveillance mechanism that degrades aberrant mRNAs. A complex comprising SMG1, UPF1, and the translation termination factors eRF1 and eRF3 (SURF) is assembled in the vicinity of a premature termination codon. Subsequently, an interaction with UPF2, UPF3b, and the exon junction complex induces the formation of the decay-inducing complex (DECID) and triggers NMD. We previously identified the RNA helicase DHX34 as an NMD factor in C. elegans and in vertebrates. Here, we investigate the mechanism by which DHX34 activates NMD in human cells. We show that DHX34 is recruited to the SURF complex via its preferential interaction with hypophosphorylated UPF1. A series of molecular transitions induced by DHX34 include enhanced recruitment of UPF2, increased UPF1 phosphorylation, and dissociation of eRF3 from UPF1. Thus, DHX34 promotes mRNP remodeling and triggers the conversion from the SURF complex to the DECID complex resulting in NMD activation.

Indexed as

Nonsense Mediated mRNA DecayHEK293 CellsHumansPeptide Termination FactorsPhosphorylationProtein BindingRibonucleoproteinsRNA-Binding ProteinsRNA HelicasesRNA InterferenceRNA, Small InterferingTrans-ActivatorsTranscription FactorsDHX34 protein, humanETF1 protein, humanmessenger ribonucleoproteinpeptide-chain-release factor 3Peptide Termination FactorsRibonucleoproteinsRNA-Binding ProteinsRNA HelicasesRNA, Small InterferingTrans-ActivatorsTranscription FactorsUPF1 protein, humanUPF2 protein, human

Identifiers

PMID25220460
PMCPMC4534575
OpenAlexW2051842708

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.