Evidence map›Paper›PMID 25220153›Full record

ArticleDevelopmental biology2014

Chibby functions in Xenopus ciliary assembly, embryonic development, and the regulation of gene expression.

Jianli Shi, Ying Zhao, Domenico Galati, Mark Winey, Michael W Klymkowsky

Abstract read
In one paragraph

Article in Developmental biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Jianli ShiMolecular, Cellular, & Developmental Biology, University of Colorado, Boulder, CO 80309-347, USA.
Ying ZhaoMolecular, Cellular, & Developmental Biology, University of Colorado, Boulder, CO 80309-347, USA.
Domenico GalatiMolecular, Cellular, & Developmental Biology, University of Colorado, Boulder, CO 80309-347, USA.
Mark WineyMolecular, Cellular, & Developmental Biology, University of Colorado, Boulder, CO 80309-347, USA.
Michael W KlymkowskyMolecular, Cellular, & Developmental Biology, University of Colorado, Boulder, CO 80309-347, USA. Electronic address: michael.klymkowsky@colorado.edu.
University of Colorado Boulder · US

Funding

Tetrahymena Basal Body DuplicationR01GM074746 · NIGMS · UNIVERSITY OF COLORADO · PI WINEY, MARK · 2006 to 2015
$3.0M
NIGMS NIH HHS 3R01GM074746-06W1NIGMS NIH HHS R01 GM074746
6 · The paper itself

Abstract

Wnt signaling and ciliogenesis are core features of embryonic development in a range of metazoans. Chibby (Cby), a basal-body associated protein, regulates β-catenin-mediated Wnt signaling in the mouse but not Drosophila. Here we present an analysis of Cby's embryonic expression and morphant phenotypes in Xenopus laevis. Cby RNA is supplied maternally, negatively regulated by Snail2 but not Twist1, preferentially expressed in the neuroectoderm, and regulates β-catenin-mediated gene expression. Reducing Cby levels reduced the density of multiciliated cells, the number of basal bodies per multiciliated cell, and the numbers of neural tube primary cilia; it also led to abnormal development of the neural crest, central nervous system, and pronephros, all defects that were rescued by a Cby-GFP chimera. Reduction of Cby led to an increase in Wnt8a and decreases in Gli2, Gli3, and Shh RNA levels. Many, but not all, morphant phenotypes were significantly reversed by the Wnt inhibitor SFRP2. These observations extend our understanding of Cby's role in mediating the network of interactions between ciliogenesis, signaling systems and tissue patterning.

Indexed as

AnimalsCarrier ProteinsCiliaDNA PrimersEmbryonic DevelopmentGene Expression Regulation, DevelopmentalImmunoblottingImmunohistochemistryIn Situ HybridizationIntracellular Signaling Peptides and ProteinsMicroscopy, ConfocalNeural PlateNuclear ProteinsReal-Time Polymerase Chain ReactionXenopus laevisXenopus ProteinsCarrier ProteinsCby1 protein, XenopusDNA PrimersIntracellular Signaling Peptides and ProteinsNuclear ProteinsXenopus ProteinsChibbyCiliaHedgehogNeural crestNeural platePronephrosSnail2Wnt signalingXenopus laevis

Identifiers

PMID25220153
PMCPMC4539557
OpenAlexW1990056379

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.