Evidence map›Paper›PMID 25217505›Full record

ArticleThe Plant cell2014

Structural studies of cinnamoyl-CoA reductase and cinnamyl-alcohol dehydrogenase, key enzymes of monolignol biosynthesis.

Haiyun Pan, Rui Zhou, Gordon V Louie, Joëlle K Mühlemann, Erin K Bomati, Marianne E Bowman, Natalia Dudareva, Richard A Dixon, Joseph P Noel, Xiaoqiang Wang

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 100 citations in OpenAlex.

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  5. Rice Cinnamoyl CoA Reductase-like GenePlants (Basel, Switzerland) · 2025
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  7. Map-based cloning of Zmccr3 and its network construction and validation for regulating maize seed germination.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
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  20. Characterization, Expression Profiling, and Biochemical Analyses of theInternational journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Haiyun PanPlant Biology Division, Samuel Roberts Noble Foundation, Ardmore, Oklahoma 73401.
Rui ZhouPlant Biology Division, Samuel Roberts Noble Foundation, Ardmore, Oklahoma 73401.
Gordon V LouieHoward Hughes Medical Institute, Jack H. Skirball Center for Chemical Biology and Proteomics, The Salk Institute for Biological Studies, La Jolla, California 92037.
Joëlle K MühlemannDepartment of Biochemistry, Purdue University, West Lafayette, Indiana 47907.
Erin K BomatiHoward Hughes Medical Institute, Jack H. Skirball Center for Chemical Biology and Proteomics, The Salk Institute for Biological Studies, La Jolla, California 92037 Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, California 92037.
Marianne E BowmanHoward Hughes Medical Institute, Jack H. Skirball Center for Chemical Biology and Proteomics, The Salk Institute for Biological Studies, La Jolla, California 92037.
Natalia DudarevaDepartment of Biochemistry, Purdue University, West Lafayette, Indiana 47907.
Richard A DixonDepartment of Biological Sciences, University of North Texas, Denton, Texas 76203-5017.
Joseph P NoelHoward Hughes Medical Institute, Jack H. Skirball Center for Chemical Biology and Proteomics, The Salk Institute for Biological Studies, La Jolla, California 92037 Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, California 92037.
Xiaoqiang WangPlant Biology Division, Samuel Roberts Noble Foundation, Ardmore, Oklahoma 73401 xiaoqiang.wang@unt.edu.
Howard Hughes Medical Institute · USNoble Research Institute · USPurdue University West Lafayette · USUniversity of California, San Diego · USUniversity of North Texas · US

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

The enzymes cinnamoyl-CoA reductase (CCR) and cinnamyl alcohol dehydrogenase (CAD) catalyze the two key reduction reactions in the conversion of cinnamic acid derivatives into monolignol building blocks for lignin polymers in plant cell walls. Here, we describe detailed functional and structural analyses of CCRs from Medicago truncatula and Petunia hybrida and of an atypical CAD (CAD2) from M. truncatula. These enzymes are closely related members of the short-chain dehydrogenase/reductase (SDR) superfamily. Our structural studies support a reaction mechanism involving a canonical SDR catalytic triad in both CCR and CAD2 and an important role for an auxiliary cysteine unique to CCR. Site-directed mutants of CAD2 (Phe226Ala and Tyr136Phe) that enlarge the phenolic binding site result in a 4- to 10-fold increase in activity with sinapaldehyde, which in comparison to the smaller coumaraldehyde and coniferaldehyde substrates is disfavored by wild-type CAD2. This finding demonstrates the potential exploitation of rationally engineered forms of CCR and CAD2 for the targeted modification of monolignol composition in transgenic plants. Thermal denaturation measurements and structural comparisons of various liganded and unliganded forms of CCR and CAD2 highlight substantial conformational flexibility of these SDR enzymes, which plays an important role in the establishment of catalytically productive complexes of the enzymes with their NADPH and phenolic substrates.

Indexed as

Alcohol OxidoreductasesAldehyde OxidoreductasesBinding SitesBiocatalysisCloning, MolecularCrystallography, X-RayCysteineDisulfidesEstersKineticsLigandsLigninMedicago truncatulaModels, MolecularMutant ProteinsNADPAlcohol OxidoreductasesAldehyde Oxidoreductasescinnamoyl CoA reductasecinnamyl alcohol dehydrogenaseCysteineDisulfidesEstersLigandsLigninMutant ProteinsNADPPropanols

Identifiers

PMID25217505
PMCPMC4213152
OpenAlexW2130189834

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.