Evidence map›Paper›PMID 25212613›Full record

ArticleGenome announcements2014

Draft genome sequences of six enterohepatic helicobacter species isolated from humans and one from rhesus macaques.

Zeli Shen, Alexander Sheh, Sarah K Young, Amr Abouelliel, Doyle V Ward, Ashlee M Earl, James G Fox

Open access · diamondAbstract read
In one paragraph

Article in Genome announcements, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Frontiers in genetics · 2023
    Article
  3. Article
  4. International journal of systematic and evolutionary microbiology · 2020
    Article
  5. Review
  6. Frontiers in microbiology · 2017
    Review
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Zeli ShenDivision of Comparative Medicine, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.
Alexander ShehDivision of Comparative Medicine, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.
Sarah K YoungBroad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.
Amr AbouellielBroad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.
Doyle V WardBroad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.
Ashlee M EarlBroad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.
James G Foxjgfox@mit.edu.
Broad Institute · USMassachusetts Institute of Technology · US

Funding

Large Scale Sequencing and Analysis of GenomesU54HG003067 · NHGRI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI GABRIEL, STACEY, LANDER, ERIC S · 2004 to 2015
$568.6M
TOXICOLOGY CORE UNITP30ES002109 · NIEHS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI YAFFE, MICHAEL B · 1985 to 2020
$25.6M
Reaction and Diffusion of NO in Biological SystemsP01CA026731 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI ESSIGMANN, JOHN M · 1985 to 2018
$25.4M
HELIOBACTER INDUCED HEPATITIS AND TUMORIGENESISR01CA067529 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI FOX, JAMES G · 1995 to 2009
$3.2M
Diagnosis and Pathobiology of Emerging Enterohepatic Helicobacter spp. in MiceR01OD011141 · OD · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI FOX, JAMES G · 2012 to 2014
$1.2M
NCI NIH HHS P01 CA026731NCI NIH HHS R01 CA067529NHGRI NIH HHS U54 HG003067NIEHS NIH HHS P30 ES002109NIH HHS R01 OD011141
6 · The paper itself

Abstract

Draft genome sequences of seven enterohepatic Helicobacter species, H. bilis, H. canadensis, H. canis, H. cinaedi, H. winghamensis, H. pullorum, and H. macacae, are presented. These isolates were obtained from clinical patients and a nonhuman primate. Due to potential zoonotic risks, we characterized antibiotic resistance markers and Helicobacter virulence factors.

Identifiers

PMID25212613
PMCPMC4161742
OpenAlexW2151683473

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.