Evidence map›Paper›PMID 25211630›Full record

ArticleJournal of cellular and molecular medicine2014

Epigenetic regulation of EFEMP1 in prostate cancer: biological relevance and clinical potential.

Mafalda Almeida, Vera L Costa, Natália R Costa, João Ramalho-Carvalho, Tiago Baptista, Franclim R Ribeiro, Paula Paulo, Manuel R Teixeira, Jorge Oliveira, Ragnhild A Lothe and 3 more

Open access · goldAbstract read
In one paragraph

Article in Journal of cellular and molecular medicine, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 25 citations in OpenAlex.

  1. Review
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  13. Epidermal Growth Factor-Containing Fibulin-Like Extracellular Matrix Protein 1 (EFEMP1) Acts as a Potential Diagnostic Biomarker for Prostate Cancer.Medical science monitor : international medical journal of experimental and clinical research · 2017
    Article
  14. Effect ofInternational journal of clinical and experimental pathology · 2017
    Article
  15. Article
  16. Article
  17. EFEMP1 rs3791679 polymorphism was associated with susceptibility to glioma.International journal of clinical and experimental pathology · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Mafalda AlmeidaCancer Biology and Epigenetics Group, Research Center of the Portuguese Oncology Institute - Porto, Porto, Portugal.
Vera L Costa
Natália R Costa
João Ramalho-Carvalho
Tiago Baptista
Franclim R Ribeiro
Paula Paulo
Manuel R Teixeira
Jorge Oliveira
Ragnhild A Lothe
Guro E Lind
Rui Henrique
Carmen Jerónimo
Instituto Português de Oncologia Francisco Gentil · PTUniversidade do Porto · PTUniversity of Oslo · NOOslo University Hospital · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Epigenetic alterations are common in prostate cancer (PCa) and seem to contribute decisively to its initiation and progression. Moreover, aberrant promoter methylation is a promising biomarker for non-invasive screening. Herein, we sought to characterize EFEMP1 as biomarker for PCa, unveiling its biological relevance in prostate carcinogenesis. Microarray analyses of treated PCa cell lines and primary tissues enabled the selection of differentially methylated genes, among which EFEMP1 was further validated by MSP and bisulfite sequencing. Assessment of biomarker performance was accomplished by qMSP. Expression analysis of EFEMP1 and characterization of histone marks were performed in tissue samples and cancer cell lines to determine the impact of epigenetic mechanisms on EFEMP1 transcriptional regulation. Phenotypic assays, using transfected cell lines, permitted the evaluation of EFEMP1's role in PCa development. EFEMP1 methylation assay discriminated PCa from normal prostate tissue (NPT; P < 0.001, Kruskall-Wallis test) and renal and bladder cancers (96% sensitivity and 98% specificity). EFEMP1 transcription levels inversely correlated with promoter methylation and histone deacetylation, suggesting that both epigenetic mechanisms are involved in gene regulation. Phenotypic assays showed that EFEMP1 de novo expression reduces malignant phenotype of PCa cells. EFEMP1 promoter methylation is prevalent in PCa and accurately discriminates PCa from non-cancerous prostate tissues and other urological neoplasms. This epigenetic alteration occurs early in prostate carcinogenesis and, in association with histone deacetylation, progressively leads to gene down-regulation, fostering cell proliferation, invasion and evasion of apoptosis.

Indexed as

ApoptosisBiomarkers, TumorCell Line, TumorCell ProliferationCpG IslandsDNA MethylationEpigenesis, GeneticExtracellular Matrix ProteinsGene Expression Regulation, NeoplasticHistonesHumansMaleNeoplasm InvasivenessPromoter Regions, GeneticProstatic NeoplasmsProtein Processing, Post-TranslationalBiomarkers, TumorEFEMP1 protein, humanExtracellular Matrix ProteinsHistonesbiomarkerdiagnosisDNA methylationEFEMP1histone post-translational modificationsprostate cancer

Identifiers

PMID25211630
PMCPMC4224561
OpenAlexW2071596922

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.