ArticlePloS one2014
Genome information of Methylobacterium oryzae, a plant-probiotic methylotroph in the phyllosphere.
Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
48 citing papers in PubMed, 126 citations in OpenAlex.
- Whole genome sequence analysis of Methylorubrum thiocyanatum VRI7-A4: a versatile sulfur-oxidizing bacterium with environmental stress resilience.Antonie van Leeuwenhoek · 2026Article
- Engineering phosphoribosylpyrophosphate synthetase in Methylobacterium radiotolerans for lettuce growth and quality enhancement.Archives of microbiology · 2026Article
- Development of a synergistic tripartite consortium and hybrid growth media for enhanced methane oxidation and assessment of in vitro plant growth-promoting traits.World journal of microbiology & biotechnology · 2026Article
- Pink powerhouses: insights into the multifaceted role of Methylobacterium in climate-resilient farming.Folia microbiologica · 2025Review
- Phyllosphere C1-microorganisms: Their interaction with plants and contribution to the global carbon cycle.Plant biotechnology (Tokyo, Japan) · 2025Article
- Article
- ACC Deaminase ProducingJournal of microbiology and biotechnology · 2025Article
- Single-cell pigment analysis of phototrophic and phyllosphere bacteria using simultaneous detection of Raman and autofluorescence spectra.Applied and environmental microbiology · 2025Article
- Article
- Beyond the pink: uncovering the secrets of pink pigmented facultative methylotrophs.Archives of microbiology · 2025Review
- Roles of Phyllosphere Microbes in Rice Health and Productivity.Plants (Basel, Switzerland) · 2024Review
- Phosphoribosylpyrophosphate synthetase as a metabolic valve advances Methylobacterium/Methylorubrum phyllosphere colonization and plant growth.Nature communications · 2024Article
- Impact of glyphosate and glyphosate-based herbicides on phyllospheric Methylobacterium.BMC plant biology · 2024Article
- Application and effectiveness of Methylobacterium symbioticum as a biological inoculant in maize and strawberry crops.Folia microbiologica · 2024Article
- Comparison of plant microbiota in diseased and healthy rice reveals methylobacteria as health signatures with biocontrol capabilities.Frontiers in plant science · 2024Article
- Soybean and Cotton Spermosphere Soil Microbiome Shows Dominance of Soilborne Copiotrophs.Microbiology spectrum · 2023Article
- The microbiome of Riccia liverworts is an important reservoir for microbial diversity in temporary agricultural crusts.Environmental microbiome · 2023Article
- Microbe-Responsive Proteomes During Plant-Microbe Interactions Between Rice Genotypes and the Multifunctional Methylobacterium oryzae CBMB20.Rice (New York, N.Y.) · 2023Article
- Complete genome analysis of sugarcane root associated endophytic diazotrophFrontiers in microbiology · 2023Article
- Insights into the genome of Methylobacterium sp. NMS14P, a novel bacterium for growth promotion of maize, chili, and sugarcane.PloS one · 2023Article
Corrections and comments
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Authors and funding
7 authors at 5 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Pink-pigmented facultative methylotrophs in the Rhizobiales are widespread in the environment, and many Methylobacterium species associated with plants produce plant growth-promoting substances. To gain insights into the life style at the phyllosphere and the genetic bases of plant growth promotion, we determined and analyzed the complete genome sequence of Methylobacterium oryzae CBMB20T, a strain isolated from rice stem. The genome consists of a 6.29-Mb chromosome and four plasmids, designated as pMOC1 to pMOC4. Among the 6,274 coding sequences in the chromosome, the bacterium has, besides most of the genes for the central metabolism, all of the essential genes for the assimilation and dissimilation of methanol that are either located in methylotrophy islands or dispersed. M. oryzae is equipped with several kinds of genes for adaptation to plant surfaces such as defense against UV radiation, oxidative stress, desiccation, or nutrient deficiency, as well as high proportion of genes related to motility and signaling. Moreover, it has an array of genes involved in metabolic pathways that may contribute to promotion of plant growth; they include auxin biosynthesis, cytokine biosynthesis, vitamin B12 biosynthesis, urea metabolism, biosorption of heavy metals or decrease of metal toxicity, pyrroloquinoline quinone biosynthesis, 1-aminocyclopropane-1-carboxylate deamination, phosphate solubilization, and thiosulfate oxidation. Through the genome analysis of M. oryzae, we provide information on the full gene complement of M. oryzae that resides in the aerial parts of plants and enhances plant growth. The plant-associated lifestyle of M. oryzae pertaining to methylotrophy and plant growth promotion, and its potential as a candidate for a bioinoculant targeted to the phyllosphere and focused on phytostimulation are illuminated.
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