Evidence map›Paper›PMID 25211129›Full record

ArticlePLoS genetics2014

Translational regulation of the DOUBLETIME/CKIδ/ε kinase by LARK contributes to circadian period modulation.

Yanmei Huang, Gerard P McNeil, F Rob Jackson

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. eLife · 2019
    Article
  10. Article
  11. Article
  12. Review
  13. What makes ribosomes tick?RNA biology · 2018
    Review
  14. Review
  15. Molecular modulators of the circadian clock: lessons from flies and mice.Cellular and molecular life sciences : CMLS · 2017
    Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. The molecular ticks of the Drosophila circadian clock.Current opinion in insect science · 2015
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Yanmei HuangDepartment of Neuroscience, Sackler School of Biomedical Sciences, Tufts University School of Medicine, Boston, Massachusetts, United States of America.
Gerard P McNeilDepartment of Biology, York College, Jamaica, New York, New York, United States of America.
F Rob JacksonDepartment of Neuroscience, Sackler School of Biomedical Sciences, Tufts University School of Medicine, Boston, Massachusetts, United States of America.
Tufts University · USYork College, City University of New York · US

Funding

TUSM/T-NEMC CENTER FOR NEUROSCIENCE RESEARCH - Imaging CoreP30NS047243 · NINDS · TUFTS UNIVERSITY BOSTON · PI JACKSON, F ROB · 2003 to 2017
$10.0M
Studies of a Neural Pacemaker Output PathwayR01HL059873 · NHLBI · TUFTS UNIVERSITY BOSTON · PI JACKSON, F ROB · 1997 to 2011
$3.9M
Glial Cell Regulation of Circadian BehaviorR01NS065900 · NINDS · TUFTS UNIVERSITY BOSTON · PI JACKSON, F ROB · 2010 to 2014
$1.8M
Characterization of RNA targets for the Drosophila protein Lark during oogenesisSC3GM089588 · NIGMS · YORK COLLEGE · PI MCNEIL, GERARD PATRICK · 2010 to 2013
$465k
NHLBI NIH HHS R01 HL059873NHLBI NIH HHS R01 HL59873NIGMS NIH HHS 5SC3GM089588NIGMS NIH HHS SC3 GM089588NINDS NIH HHS P30 NS047243NINDS NIH HHS R01 NS065900
6 · The paper itself

Abstract

The Drosophila homolog of Casein Kinase I δ/ε, DOUBLETIME (DBT), is required for Wnt, Hedgehog, Fat and Hippo signaling as well as circadian clock function. Extensive studies have established a critical role of DBT in circadian period determination. However, how DBT expression is regulated remains largely unexplored. In this study, we show that translation of dbt transcripts are directly regulated by a rhythmic RNA-binding protein (RBP) called LARK (known as RBM4 in mammals). LARK promotes translation of specific alternative dbt transcripts in clock cells, in particular the dbt-RC transcript. Translation of dbt-RC exhibits circadian changes under free-running conditions, indicative of clock regulation. Translation of a newly identified transcript, dbt-RE, is induced by light in a LARK-dependent manner and oscillates under light/dark conditions. Altered LARK abundance affects circadian period length, and this phenotype can be modified by different dbt alleles. Increased LARK delays nuclear degradation of the PERIOD (PER) clock protein at the beginning of subjective day, consistent with the known role of DBT in PER dynamics. Taken together, these data support the idea that LARK influences circadian period and perhaps responses of the clock to light via the regulated translation of DBT. Our study is the first to investigate translational control of the DBT kinase, revealing its regulation by LARK and a novel role of this RBP in Drosophila circadian period modulation.

Indexed as

AllelesAnimalsCasein Kinase 1 epsilonCircadian ClocksCircadian RhythmDarknessDrosophilaDrosophila ProteinsGene Expression RegulationLightPeriod Circadian ProteinsProtein BiosynthesisRNA-Binding ProteinsCasein Kinase 1 epsilondco protein, DrosophilaDrosophila ProteinsLark protein, DrosophilaPeriod Circadian ProteinsRNA-Binding Proteins

Identifiers

PMID25211129
PMCPMC4161311
OpenAlexW1982786754

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.