Evidence map›Paper›PMID 25211095›Full record

ArticleOncotarget2014

Methylation of miR-155-3p in mantle cell lymphoma and other non-Hodgkin's lymphomas.

Rita Lh Yim, Kwan Yeung Wong, Yok Lam Kwong, Florence Loong, Chung Ying Leung, Raymond Chu, William Wai Lung Lam, Pak Kwan Hui, Raymond Lai, Chor Sang Chim

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
  2. Article
  3. Role of microRNAs in Chronic Lymphocytic Leukemia.International journal of molecular sciences · 2023
    Review
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. MicroRNA-155-3p promotes hepatocellular carcinoma formation by suppressing FBXW7 expression.Journal of experimental & clinical cancer research : CR · 2016
    Article
  18. Article
  19. MiRNA-based therapeutic intervention of cancer.Journal of hematology & oncology · 2015
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 3 countries.

Rita Lh YimDepartment of Medicine, Queen Mary Hospital, University of Hong Kong, Hong Kong.
Kwan Yeung WongDepartment of Medicine, Queen Mary Hospital, University of Hong Kong, Hong Kong.
Yok Lam KwongDepartment of Medicine, Queen Mary Hospital, University of Hong Kong, Hong Kong.
Florence LoongDepartment of Pathology, Queen Mary Hospital, Hong Kong.
Chung Ying LeungDepartment of Pathology, United Christian Hospital, Hong Kong.
Raymond ChuDepartment of Pathology, Pamela Youde Nethersole Eastern Hospital, Hong Kong.
William Wai Lung LamDepartment of Pathology, Princess Margaret Hospital, Hong Kong.
Pak Kwan HuiDepartment of Pathology, Kwong Wah Hospital, Hong Kong.
Raymond LaiDepartment of Laboratory Medicine and Pathology, University of Alberta, Edmonton, Canada.
Chor Sang ChimDepartment of Medicine, Queen Mary Hospital, University of Hong Kong, Hong Kong.
Queen Mary Hospital · CNUniversity of Hong Kong · HKKwong Wah Hospital · CNPamela Youde Nethersole Eastern Hospital · CNUnited Christian Hospital · CNUniversity of Alberta · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mantle cell lymphoma (MCL) is an aggressive B-cell non-Hodgkin's lymphoma (NHL). In cancers, tumor suppressive microRNAs may be silenced by DNA hypermethylation. By microRNA profiling of representative EBV-negative MCL cell lines before and after demethylation treatment, miR-155-3p was found significantly restored. Methylation-specific PCR, verified by pyrosequencing, showed complete methylation of miR-155-3p in one MCL cell line (REC-1). 5-aza-2'-deoxycytidine treatment of REC-1 led to demethylation and re-expression of miR-155-3p. Over-expression of miR-155-3p led to increased sub-G1 apoptotic cells and reduced cellular viability, demonstrating its tumor suppressive properties. By luciferase assay, lymphotoxin-beta (LT-β) was validated as a miR-155-3p target. In 31 primary MCL, miR-155-3p was found hypermethylated in 6(19%) cases. To test if methylation of miR-155-3p was MCL-specific, miR-155-3p methylation was tested in an additional 191 B-cell, T-cell and NK-cell NHLs, yielding miR-155-3p methylation in 66(34.6%) including 36(27%) non-MCL B-cell, 24(53%) T-cell and 6(46%) of NK-cell lymphoma. Moreover, in 72 primary NHL samples with RNA, miR-155-3p methylation correlated with miR-155-3p downregulation (p=0.024), and LT-β upregulation (p=0.043). Collectively, miR-155-3p is a potential tumor suppressive microRNA hypermethylated in MCL and other NHL subtypes. As miR-155-3p targets LT-β, which is an upstream activator of the non-canonical NF-kB signaling, miR-155-3p methylation is potentially important in lymphomagenesis.

Indexed as

Base SequenceCell Line, TumorDNA MethylationEpigenesis, GeneticHumansLymphoma, Mantle-CellLymphoma, Non-HodgkinLymphotoxin-betaMicroRNAsPromoter Regions, GeneticUp-RegulationLTB protein, humanLymphotoxin-betaMicroRNAsMIRN155 microRNA, human

Identifiers

PMID25211095
PMCPMC4259436
OpenAlexW2170538853

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.