Evidence map›Paper›PMID 25211016›Full record

ArticlePloS one2014

RBFOX1 cooperates with MBNL1 to control splicing in muscle, including events altered in myotonic dystrophy type 1.

Roscoe Klinck, Angélique Fourrier, Philippe Thibault, Johanne Toutant, Mathieu Durand, Elvy Lapointe, Marie-Laure Caillet-Boudin, Nicolas Sergeant, Geneviève Gourdon, Giovanni Meola and 3 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 68 citations in OpenAlex.

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  9. SpecificMolecular therapy. Nucleic acids · 2023
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  15. Review
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  17. Splicing alterations in healthy aging and disease.Wiley interdisciplinary reviews. RNA · 2021
    Review
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  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 3 countries.

Roscoe KlinckDepartment of Microbiology and Infectiology, Faculty of Medicine and Heath Sciences, Université de Sherbrooke, Sherbrooke, Quebec, Canada; Laboratory of Functional Genomics, Faculty of Medicine and Heath Sciences, Université de Sherbrooke, Sherbrooke, Quebec, Canada.
Angélique FourrierCentre de Recherche du CHUL (Centre Hospitalier Universitaire de Québec), Université Laval, Ste-Foy, Quebec, Canada.
Philippe ThibaultLaboratory of Functional Genomics, Faculty of Medicine and Heath Sciences, Université de Sherbrooke, Sherbrooke, Quebec, Canada.
Johanne ToutantDepartment of Microbiology and Infectiology, Faculty of Medicine and Heath Sciences, Université de Sherbrooke, Sherbrooke, Quebec, Canada.
Mathieu DurandLaboratory of Functional Genomics, Faculty of Medicine and Heath Sciences, Université de Sherbrooke, Sherbrooke, Quebec, Canada.
Elvy LapointeLaboratory of Functional Genomics, Faculty of Medicine and Heath Sciences, Université de Sherbrooke, Sherbrooke, Quebec, Canada.
Marie-Laure Caillet-BoudinInserm UMR 837, Université Lille Nord de France, IFR114/IMPRT, Lille, France.
Nicolas SergeantInserm UMR 837, Université Lille Nord de France, IFR114/IMPRT, Lille, France.
Geneviève GourdonInserm U781, Hôpital Necker-EM and Université Paris Descartes-Sorbonne Paris Cité, Institut Imagine, Paris, France.
Giovanni MeolaDepartment of Biomedical Sciences for Health, University of Milan, Milan, Italy.
Denis FurlingUPMC-Université Paris 06, Institute of Myology, Paris, France.
Jack PuymiratCentre de Recherche du CHUL (Centre Hospitalier Universitaire de Québec), Université Laval, Ste-Foy, Quebec, Canada.
Benoit ChabotDepartment of Microbiology and Infectiology, Faculty of Medicine and Heath Sciences, Université de Sherbrooke, Sherbrooke, Quebec, Canada; Laboratory of Functional Genomics, Faculty of Medicine and Heath Sciences, Université de Sherbrooke, Sherbrooke, Quebec, Canada.
Université de Sherbrooke · CAInserm · FRCentre hospitalier universitaire de Québec · CASorbonne Université · FRUniversité Laval · CAUniversity of Milan · IT

Funding

Canadian Institutes of Health Research 98658Canadian Institutes of Health Research MOP93917
6 · The paper itself

Abstract

With the goal of identifying splicing alterations in myotonic dystrophy 1 (DM1) tissues that may yield insights into targets or mechanisms, we have surveyed mis-splicing events in three systems using a RT-PCR screening and validation platform. First, a transgenic mouse model expressing CUG-repeats identified splicing alterations shared with other mouse models of DM1. Second, using cell cultures from human embryonic muscle, we noted that DM1-associated splicing alterations were significantly enriched in cytoskeleton (e.g. SORBS1, TACC2, TTN, ACTN1 and DMD) and channel (e.g. KCND3 and TRPM4) genes. Third, of the splicing alterations occurring in adult DM1 tissues, one produced a dominant negative variant of the splicing regulator RBFOX1. Notably, half of the splicing events controlled by MBNL1 were co-regulated by RBFOX1, and several events in this category were mis-spliced in DM1 tissues. Our results suggest that reduced RBFOX1 activity in DM1 tissues may amplify several of the splicing alterations caused by the deficiency in MBNL1.

Indexed as

AdultAlternative SplicingAnimalsCell LineFemaleHumansMaleMice, Inbred C57BLMice, TransgenicMiddle AgedMuscle, SkeletalMyoblastsMyotonic DystrophyRNA-Binding ProteinsRNA Splicing FactorsMBNL1 protein, humanRBFOX1 protein, humanRNA-Binding ProteinsRNA Splicing Factors

Identifiers

PMID25211016
PMCPMC4161394
OpenAlexW2079759083

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.