Evidence map›Paper›PMID 25210937›Full record

ArticleGenetics in medicine : official journal of the American College of Medical Genetics2015

Fragile X full mutation expansions are inhibited by one or more AGG interruptions in premutation carriers.

Sarah L Nolin, Anne Glicksman, Nicole Ersalesi, Carl Dobkin, W Ted Brown, Ru Cao, Eliot Blatt, Sachin Sah, Gary J Latham, Andrew G Hadd

Open access · hybridAbstract read
PubMed Publisher
In one paragraph

Article in Genetics in medicine : official journal of the American College of Medical Genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 88 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
88citing papers in PubMed, 1 pooled it
8.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

88 citing papers in PubMed, 1 synthesis or guideline pooled it, 138 citations in OpenAlex.

  1. Does theFMR1 gene affect IVF success?Reproductive biomedicine online · 2019
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  12. Beyond the Synapse:International journal of molecular sciences · 2024
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  15. Prevalence of theGenes · 2024
    Article
  16. Review
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  18. Review
  19. Review
  20. Review

28 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Sarah L NolinDepartment of Human Genetics, New York State Institute for Basic Research in Developmental Disabilities, Staten Island, New York, USA.
Anne GlicksmanDepartment of Human Genetics, New York State Institute for Basic Research in Developmental Disabilities, Staten Island, New York, USA.
Nicole ErsalesiDepartment of Human Genetics, New York State Institute for Basic Research in Developmental Disabilities, Staten Island, New York, USA.
Carl DobkinDepartment of Human Genetics, New York State Institute for Basic Research in Developmental Disabilities, Staten Island, New York, USA.
W Ted BrownDepartment of Human Genetics, New York State Institute for Basic Research in Developmental Disabilities, Staten Island, New York, USA.
Ru CaoAsuragen Inc., Austin, Texas, USA.
Eliot BlattAsuragen Inc., Austin, Texas, USA.
Sachin SahAsuragen Inc., Austin, Texas, USA.
Gary J LathamAsuragen Inc., Austin, Texas, USA.
Andrew G HaddAsuragen Inc., Austin, Texas, USA.
Asuragen (United States) · USNew York State Office for People With Developmental Disabilities · US

Funding

Technologies for Mapping Interspersed AGG Sequences in the FMR1 GeneR44HD066953 · NICHD · ASURAGEN, INC. · PI CHEN, LIANGJING CHEN · 2011 to 2012
$1.3M
NICHD NIH HHS 5R44HD066953-03
6 · The paper itself

Abstract

purposeFragile X CGG repeat alleles often contain one or more AGG interruptions that influence allele stability and risk of a full mutation transmission from parent to child. We have examined transmissions of maternal and paternal alleles with 45-90 repeats to quantify the effect of AGG interruptions on fragile X repeat instability.

methodsA novel FMR1 polymerase chain reaction assay was used to determine CGG repeat length and AGG interruptions for 1,040 alleles from 705 families.

resultsWe grouped transmissions into nine categories of five repeats by parental size and found that in every size category, alleles with no AGGs had the greatest risk for instability. For maternal alleles <75 repeats, 89% (24/27) that expanded to a full mutation had no AGGs. Two contractions in maternal transmission were accompanied by loss of AGGs, suggesting a mechanism for generating alleles that lack AGG interruptions. Maternal age was examined as a factor in full mutation expansions using prenatal samples to minimize ascertainment bias, and a possible effect was observed though it was not statistically significant (P = 0.06).

conclusionThese results strengthen the association of AGG repeats with CGG repeat stability and provide more accurate risk estimates of full mutation expansions for women with 45-90 repeat alleles.

Indexed as

HeterozygoteMutationTrinucleotide Repeat ExpansionAge FactorsAllelesAnticipation, GeneticFamilyFemaleFragile X Messenger Ribonucleoprotein 1Fragile X SyndromeGenetic TestingGenomic InstabilityHumansMaleMass ScreeningMosaicismFragile X Messenger Ribonucleoprotein 1

Identifiers

PMID25210937
OpenAlexW2052936741

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.